MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:3080374-3460385

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20 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm3053	5	3090769 to 3095074	4305	+	pseudogene	predicted gene 3053
Gm43530	5	3099390 to 3099663	273	+	pseudogene	predicted gene 43530
Gm8715	5	3123777 to 3127383	3606	+	pseudogene	predicted gene 8715
Gm18985	5	3212940 to 3213760	820	+	pseudogene	predicted gene, 18985
Tssr45032	5	3236381 to 3236387	6	+	TSS region	transcription start site region 45032
Gm15772	5	3236431 to 3236868	437	+	pseudogene	predicted gene 15772
Gm36470	5	3270129 to 3343755	73626	-	lncRNA gene	predicted gene, 36470
Gm36548	5	3270319 to 3284584	14265	+	lincRNA gene	predicted gene, 36548
Tssr45033	5	3270374 to 3270385	11	+	TSS region	transcription start site region 45033
Tssr1410	5	3340965 to 3340970	5	+	TSS region	transcription start site region 1410
Cpgi15508	5	3341079 to 3344635	3556		CpG island	CpG island 15508
Tssr45034	5	3341196 to 3341211	15	+	TSS region	transcription start site region 45034
Tssr45035	5	3341437 to 3341466	29	+	TSS region	transcription start site region 45035
Tssr45036	5	3341477 to 3341485	8	+	TSS region	transcription start site region 45036
Tssr45037	5	3341522 to 3341547	25	+	TSS region	transcription start site region 45037
Tssr49983	5	3342403 to 3342410	7	-	TSS region	transcription start site region 49983
Cdk6	5	3343893 to 3531008	187115	+	protein coding gene	cyclin-dependent kinase 6
Tssr45038	5	3343907 to 3343945	38	+	TSS region	transcription start site region 45038
Tssr45039	5	3344194 to 3344241	47	+	TSS region	transcription start site region 45039
Gm29868	5	3393492 to 3435896	42404	-	lncRNA gene	predicted gene, 29868