Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:30631602-30791612

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(5D5Mit348-D5Mit389)6Jcs 5 24919119 to 30647294 5728175 complex/cluster/region deletion, Chr 5, John C. Schimenti 6
D5Dcr38 5 30635698 to 30635793 95 DNA segment DNA Segment, Chr 5, Derry C. Roopenian 38
D5Jcs66 5 30636181 to 30636338 157 DNA segment DNA segment, Chr 5, John C. Schimenti 66
D5Mit389 5 30647188 to 30647294 106 DNA segment DNA Segment, Chr 5 Massachusetts Institute of Technology 389
Cpgi15682 5 30647733 to 30648369 636 CpG island CpG island 15682
Tssr45603 5 30647921 to 30647932 11 + TSS region transcription start site region 45603
Tssr45604 5 30647935 to 30647998 63 + TSS region transcription start site region 45604
Mir5625 5 30647936 to 30648015 79 + miRNA gene microRNA 5625
Slc35f6 5 30647939 to 30659729 11790 + protein coding gene solute carrier family 35, member F6
Tssr45605 5 30648005 to 30648029 24 + TSS region transcription start site region 45605
Cpgi15683 5 30666808 to 30667351 543 CpG island CpG island 15683
Cenpa 5 30666886 to 30674837 7951 + protein coding gene centromere protein A
Tssr45606 5 30666890 to 30666963 73 + TSS region transcription start site region 45606
Tssr45607 5 30674158 to 30674173 15 + TSS region transcription start site region 45607
Gm18389 5 30687601 to 30688167 566 + pseudogene predicted gene, 18389
Cpgi15684 5 30711174 to 30713793 2619 CpG island CpG island 15684
Dpysl5 5 30711569 to 30799369 87800 + protein coding gene dihydropyrimidinase-like 5
Tssr45608 5 30711577 to 30711586 9 + TSS region transcription start site region 45608
Tssr45609 5 30711590 to 30711597 7 + TSS region transcription start site region 45609
Tssr45610 5 30711602 to 30711612 10 + TSS region transcription start site region 45610
Tssr45611 5 30711849 to 30711905 56 + TSS region transcription start site region 45611
D5Jcs303 5 30730444 to 30730596 152 DNA segment DNA segment, Chr 5, John C. Schimenti 303
Tssr45612 5 30746110 to 30746116 6 + TSS region transcription start site region 45612
Gm42764 5 30759032 to 30760477 1445 + sense intronic lncRNA gene predicted gene 42764
Cpgi15685 5 30774973 to 30775264 291 CpG island CpG island 15685
Tssr45613 5 30778099 to 30778121 22 + TSS region transcription start site region 45613
Tssr45614 5 30778862 to 30778888 26 + TSS region transcription start site region 45614