Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Del(5D5Mit348-D5Mit389)6Jcs | 5 | 5728175 | complex/cluster/region | deletion, Chr 5, John C. Schimenti 6 | ||
Otof | 5 | 94870 | - | protein coding gene | otoferlin | |
D5Jcs300 | 5 | 150 | DNA segment | DNA segment, Chr 5, John C. Schimenti 300 | ||
Tssr50489 | 5 | 3 | - | TSS region | transcription start site region 50489 | |
Tssr50490 | 5 | 24 | - | TSS region | transcription start site region 50490 | |
Tssr50491 | 5 | 9 | - | TSS region | transcription start site region 50491 | |
Tssr1444 | 5 | 22 | - | TSS region | transcription start site region 1444 | |
Tssr50492 | 5 | 33 | - | TSS region | transcription start site region 50492 | |
Tssr1445 | 5 | 17 | - | TSS region | transcription start site region 1445 | |
Cpgi15679 | 5 | 360 | CpG island | CpG island 15679 | ||
Tssr45583 | 5 | 48 | + | TSS region | transcription start site region 45583 | |
1700001C02Rik | 5 | 18041 | + | protein coding gene | RIKEN cDNA 1700001C02 gene | |
D5Jcs301 | 5 | 231 | DNA segment | DNA segment, Chr 5, John C. Schimenti 301 | ||
D5Dcr37 | 5 | 96 | DNA segment | DNA Segment, Chr 5, Derry C. Roopenian 37 | ||
Cib4 | 5 | 60253 | - | protein coding gene | calcium and integrin binding family member 4 | |
Gm25666 | 5 | 106 | - | snRNA gene | predicted gene, 25666 | |
Gm42765 | 5 | 14373 | + | antisense lncRNA gene | predicted gene 42765 | |
Tssr50493 | 5 | 12 | - | TSS region | transcription start site region 50493 | |
Tssr50494 | 5 | 16 | - | TSS region | transcription start site region 50494 | |
Gm40272 | 5 | 6505 | + | lncRNA gene | predicted gene, 40272 | |
Gm9899 | 5 | 14632 | - | lncRNA gene | predicted gene 9899 | |
Tssr45584 | 5 | 13 | + | TSS region | transcription start site region 45584 | |
Cpgi15680 | 5 | 1755 | CpG island | CpG island 15680 | ||
Tssr45585 | 5 | 11 | + | TSS region | transcription start site region 45585 | |
Tssr45586 | 5 | 93 | + | TSS region | transcription start site region 45586 | |
Kcnk3 | 5 | 37100 | + | protein coding gene | potassium channel, subfamily K, member 3 | |
Tssr45587 | 5 | 11 | + | TSS region | transcription start site region 45587 | |
Tssr45588 | 5 | 30 | + | TSS region | transcription start site region 45588 | |
Tssr50495 | 5 | 13 | - | TSS region | transcription start site region 50495 | |
Tssr50496 | 5 | 13 | - | TSS region | transcription start site region 50496 | |
Tssr50497 | 5 | 15 | - | TSS region | transcription start site region 50497 | |
Tssr45589 | 5 | 13 | + | TSS region | transcription start site region 45589 | |
D5Jcs302 | 5 | 199 | DNA segment | DNA segment, Chr 5, John C. Schimenti 302 | ||
Tssr45590 | 5 | 18 | + | TSS region | transcription start site region 45590 | |
Cpgi15681 | 5 | 1187 | CpG island | CpG island 15681 | ||
Tssr45591 | 5 | 15 | + | TSS region | transcription start site region 45591 | |
Tssr45592 | 5 | 14 | + | TSS region | transcription start site region 45592 | |
Tssr45593 | 5 | 23 | + | TSS region | transcription start site region 45593 | |
Tssr45594 | 5 | 11 | + | TSS region | transcription start site region 45594 | |
Tssr45595 | 5 | 11 | + | TSS region | transcription start site region 45595 | |
Tssr45596 | 5 | 22 | + | TSS region | transcription start site region 45596 | |
Tssr45597 | 5 | 13 | + | TSS region | transcription start site region 45597 | |
Tssr45598 | 5 | 26 | + | TSS region | transcription start site region 45598 | |
Tssr50498 | 5 | 10 | - | TSS region | transcription start site region 50498 | |
Tssr45599 | 5 | 37 | + | TSS region | transcription start site region 45599 | |
Tssr45600 | 5 | 7 | + | TSS region | transcription start site region 45600 | |
Tssr50499 | 5 | 40 | - | TSS region | transcription start site region 50499 | |
Tssr45601 | 5 | 14 | + | TSS region | transcription start site region 45601 | |
Tssr45602 | 5 | 7 | + | TSS region | transcription start site region 45602 | |
D5Dcr38 | 5 | 95 | DNA segment | DNA Segment, Chr 5, Derry C. Roopenian 38 | ||
D5Jcs66 | 5 | 157 | DNA segment | DNA segment, Chr 5, John C. Schimenti 66 | ||
D5Mit389 | 5 | 106 | DNA segment | DNA Segment, Chr 5 Massachusetts Institute of Technology 389 | ||
Cpgi15682 | 5 | 636 | CpG island | CpG island 15682 | ||
Tssr45603 | 5 | 11 | + | TSS region | transcription start site region 45603 | |
Tssr45604 | 5 | 63 | + | TSS region | transcription start site region 45604 | |
Mir5625 | 5 | 79 | + | miRNA gene | microRNA 5625 | |
Slc35f6 | 5 | 11790 | + | protein coding gene | solute carrier family 35, member F6 | |
Tssr45605 | 5 | 24 | + | TSS region | transcription start site region 45605 | |
Cpgi15683 | 5 | 543 | CpG island | CpG island 15683 | ||
Cenpa | 5 | 7951 | + | protein coding gene | centromere protein A | |
Tssr45606 | 5 | 73 | + | TSS region | transcription start site region 45606 | |
Tssr45607 | 5 | 15 | + | TSS region | transcription start site region 45607 | |
Gm18389 | 5 | 566 | + | pseudogene | predicted gene, 18389 | |
Cpgi15684 | 5 | 2619 | CpG island | CpG island 15684 | ||
Dpysl5 | 5 | 87800 | + | protein coding gene | dihydropyrimidinase-like 5 | |
Tssr45608 | 5 | 9 | + | TSS region | transcription start site region 45608 | |
Tssr45609 | 5 | 7 | + | TSS region | transcription start site region 45609 | |
Tssr45610 | 5 | 10 | + | TSS region | transcription start site region 45610 | |
Tssr45611 | 5 | 56 | + | TSS region | transcription start site region 45611 | |
D5Jcs303 | 5 | 152 | DNA segment | DNA segment, Chr 5, John C. Schimenti 303 | ||
Tssr45612 | 5 | 6 | + | TSS region | transcription start site region 45612 | |
Gm42764 | 5 | 1445 | + | sense intronic lncRNA gene | predicted gene 42764 | |
Cpgi15685 | 5 | 291 | CpG island | CpG island 15685 | ||
Tssr45613 | 5 | 22 | + | TSS region | transcription start site region 45613 | |
Tssr45614 | 5 | 26 | + | TSS region | transcription start site region 45614 | |
Tssr45615 | 5 | 27 | + | TSS region | transcription start site region 45615 | |
Tssr45616 | 5 | 18 | + | TSS region | transcription start site region 45616 | |
Tssr45617 | 5 | 12 | + | TSS region | transcription start site region 45617 | |
Tssr45618 | 5 | 7 | + | TSS region | transcription start site region 45618 | |
Tssr45619 | 5 | 17 | + | TSS region | transcription start site region 45619 | |
Tssr45620 | 5 | 60 | + | TSS region | transcription start site region 45620 | |
Tssr45621 | 5 | 50 | + | TSS region | transcription start site region 45621 | |
Gm46907 | 5 | 15354 | - | lncRNA gene | predicted gene, 46907 | |
D5Dcr40 | 5 | 99 | DNA segment | DNA Segment, Chr 5, Derry C. Roopenian 40 | ||
Cpgi15686 | 5 | 1017 | CpG island | CpG island 15686 | ||
Tssr45622 | 5 | 46 | + | TSS region | transcription start site region 45622 | |
Mapre3 | 5 | 51465 | + | protein coding gene | microtubule-associated protein, RP/EB family, member 3 | |
Tssr50500 | 5 | 10 | - | TSS region | transcription start site region 50500 | |
Tssr45623 | 5 | 54 | + | TSS region | transcription start site region 45623 | |
Tssr45624 | 5 | 16 | + | TSS region | transcription start site region 45624 | |
Tssr45625 | 5 | 11 | + | TSS region | transcription start site region 45625 | |
Gm19409 | 5 | 2857 | + | sense intronic lncRNA gene | predicted gene, 19409 | |
Gm15461 | 5 | 4635 | - | antisense lncRNA gene | predicted gene 15461 | |
Tssr50501 | 5 | 27 | - | TSS region | transcription start site region 50501 | |
Tssr45626 | 5 | 6 | + | TSS region | transcription start site region 45626 | |
Tssr45627 | 5 | 5 | + | TSS region | transcription start site region 45627 | |
Tssr45628 | 5 | 40 | + | TSS region | transcription start site region 45628 | |
Gm43808 | 5 | 2064 | - | unclassified gene | predicted gene 43808 | |
Cpgi15687 | 5 | 934 | CpG island | CpG island 15687 | ||
Tssr45629 | 5 | 3 | + | TSS region | transcription start site region 45629 | |
Tssr45630 | 5 | 22 | + | TSS region | transcription start site region 45630 | |
Tssr45631 | 5 | 41 | + | TSS region | transcription start site region 45631 | |
Tmem214 | 5 | 7822 | + | protein coding gene | transmembrane protein 214 | |
Tssr45632 | 5 | 34 | + | TSS region | transcription start site region 45632 | |
Gm35795 | 5 | 2725 | - | lncRNA gene | predicted gene, 35795 | |
Cpgi15688 | 5 | 647 | CpG island | CpG island 15688 | ||
Tssr45633 | 5 | 13 | + | TSS region | transcription start site region 45633 | |
Tssr45634 | 5 | 4 | + | TSS region | transcription start site region 45634 | |
n-TYgta9 | 5 | 88 | + | tRNA gene | nuclear encoded tRNA tyrosine 9 (anticodon GTA) | |
Agbl5 | 5 | 18174 | + | protein coding gene | ATP/GTP binding protein-like 5 | |
n-TAagc15 | 5 | 72 | + | tRNA gene | nuclear encoded tRNA alanine 15 (anticodon AGC) | |
Cpgi15689 | 5 | 1046 | CpG island | CpG island 15689 | ||
Tssr50502 | 5 | 10 | - | TSS region | transcription start site region 50502 | |
Tssr45635 | 5 | 70 | + | TSS region | transcription start site region 45635 | |
Tssr45636 | 5 | 41 | + | TSS region | transcription start site region 45636 | |
Tssr45637 | 5 | 24 | + | TSS region | transcription start site region 45637 | |
Tssr45638 | 5 | 78 | + | TSS region | transcription start site region 45638 | |
Tssr45639 | 5 | 12 | + | TSS region | transcription start site region 45639 | |
5930420M18Rik | 5 | 2280 | + | unclassified gene | RIKEN cDNA 5930420M18 gene | |
Ost4 | 5 | 1294 | - | protein coding gene | oligosaccharyltransferase complex subunit 4 (non-catalytic) | |
Cpgi15690 | 5 | 1128 | CpG island | CpG island 15690 | ||
Tssr50503 | 5 | 11 | - | TSS region | transcription start site region 50503 | |
Tssr50504 | 5 | 61 | - | TSS region | transcription start site region 50504 | |
Tssr45640 | 5 | 21 | + | TSS region | transcription start site region 45640 | |
Tssr45641 | 5 | 5 | + | TSS region | transcription start site region 45641 | |
Emilin1 | 5 | 7875 | + | protein coding gene | elastin microfibril interfacer 1 | |
Tssr45642 | 5 | 21 | + | TSS region | transcription start site region 45642 | |
Tssr45643 | 5 | 33 | + | TSS region | transcription start site region 45643 | |
Tssr45644 | 5 | 11 | + | TSS region | transcription start site region 45644 | |
Tssr45645 | 5 | 11 | + | TSS region | transcription start site region 45645 | |
Tssr45646 | 5 | 42 | + | TSS region | transcription start site region 45646 | |
Tssr45647 | 5 | 105 | + | TSS region | transcription start site region 45647 | |
Cpgi15691 | 5 | 1404 | CpG island | CpG island 15691 | ||
Khk | 5 | 9812 | + | protein coding gene | ketohexokinase | |
Tssr45648 | 5 | 26 | + | TSS region | transcription start site region 45648 | |
Tssr45649 | 5 | 16 | + | TSS region | transcription start site region 45649 | |
Tssr45650 | 5 | 41 | + | TSS region | transcription start site region 45650 | |
Tssr45651 | 5 | 29 | + | TSS region | transcription start site region 45651 | |
Cgref1 | 5 | 12337 | - | protein coding gene | cell growth regulator with EF hand domain 1 | |
Tssr50505 | 5 | 10 | - | TSS region | transcription start site region 50505 | |
D5Jcs305 | 5 | 156 | DNA segment | DNA segment, Chr 5, John C. Schimenti 305 | ||
Cpgi15692 | 5 | 618 | CpG island | CpG island 15692 | ||
Tssr50506 | 5 | 62 | - | TSS region | transcription start site region 50506 | |
Tssr1446 | 5 | 9 | - | TSS region | transcription start site region 1446 | |
Tssr50507 | 5 | 81 | - | TSS region | transcription start site region 50507 | |
Tssr50508 | 5 | 26 | - | TSS region | transcription start site region 50508 | |
Tssr50509 | 5 | 9 | - | TSS region | transcription start site region 50509 | |
Tssr50510 | 5 | 5 | - | TSS region | transcription start site region 50510 | |
Cpgi15693 | 5 | 458 | CpG island | CpG island 15693 | ||
Tssr50511 | 5 | 20 | - | TSS region | transcription start site region 50511 | |
Tssr45652 | 5 | 87 | + | TSS region | transcription start site region 45652 | |
Abhd1 | 5 | 5025 | + | protein coding gene | abhydrolase domain containing 1 | |
Tssr45653 | 5 | 12 | + | TSS region | transcription start site region 45653 | |
Preb | 5 | 8689 | - | protein coding gene | prolactin regulatory element binding | |
Tssr50512 | 5 | 23 | - | TSS region | transcription start site region 50512 | |
Cpgi15694 | 5 | 1005 | CpG island | CpG island 15694 | ||
Tssr50513 | 5 | 12 | - | TSS region | transcription start site region 50513 | |
Tssr50514 | 5 | 11 | - | TSS region | transcription start site region 50514 | |
Tssr50515 | 5 | 11 | - | TSS region | transcription start site region 50515 | |
Tssr1447 | 5 | 3 | - | TSS region | transcription start site region 1447 | |
Tssr50516 | 5 | 84 | - | TSS region | transcription start site region 50516 | |
Tssr50517 | 5 | 13 | - | TSS region | transcription start site region 50517 | |
Tssr1448 | 5 | 11 | + | TSS region | transcription start site region 1448 | |
Tssr50518 | 5 | 14 | - | TSS region | transcription start site region 50518 | |
Tssr45654 | 5 | 11 | + | TSS region | transcription start site region 45654 | |
Tssr45655 | 5 | 9 | + | TSS region | transcription start site region 45655 | |
Tssr45656 | 5 | 12 | + | TSS region | transcription start site region 45656 | |
Tcf23 | 5 | 8356 | + | protein coding gene | transcription factor 23 | |
Tssr45657 | 5 | 17 | + | TSS region | transcription start site region 45657 | |
Cpgi15695 | 5 | 370 | CpG island | CpG island 15695 | ||
Slc5a6 | 5 | 12888 | - | protein coding gene | solute carrier family 5 (sodium-dependent vitamin transporter), member 6 | |
Tssr50519 | 5 | 14 | - | TSS region | transcription start site region 50519 | |
D5Jcs306 | 5 | 193 | DNA segment | DNA segment, Chr 5, John C. Schimenti 306 | ||
Cpgi15696 | 5 | 1148 | CpG island | CpG island 15696 | ||
Tssr50520 | 5 | 9 | - | TSS region | transcription start site region 50520 | |
Tssr50521 | 5 | 7 | - | TSS region | transcription start site region 50521 | |
Tssr50522 | 5 | 11 | - | TSS region | transcription start site region 50522 | |
Tssr50523 | 5 | 24 | - | TSS region | transcription start site region 50523 | |
Tssr50524 | 5 | 40 | - | TSS region | transcription start site region 50524 | |
Tssr45658 | 5 | 46 | + | TSS region | transcription start site region 45658 | |
Atraid | 5 | 5993 | + | protein coding gene | all-trans retinoic acid induced differentiation factor | |
Tssr45659 | 5 | 5 | + | TSS region | transcription start site region 45659 | |
Cpgi15697 | 5 | 1121 | CpG island | CpG island 15697 | ||
Tssr45660 | 5 | 43 | + | TSS region | transcription start site region 45660 | |
Cad | 5 | 23699 | + | protein coding gene | carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase | |
Tssr45661 | 5 | 44 | + | TSS region | transcription start site region 45661 |