MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:30306323-30506473

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Drc1	5	30281388 to 30366695	85307	+	protein coding gene	dynein regulatory complex subunit 1
Cpgi15678	5	30342779 to 30342938	159		CpG island	CpG island 15678
Tssr50488	5	30355228 to 30355275	47	-	TSS region	transcription start site region 50488
Gm43755	5	30366046 to 30366490	444	+	sense intronic lncRNA gene	predicted gene 43755
Otof	5	30367062 to 30461932	94870	-	protein coding gene	otoferlin
D5Jcs300	5	30406323 to 30406473	150		DNA segment	DNA segment, Chr 5, John C. Schimenti 300
Tssr50489	5	30408030 to 30408033	3	-	TSS region	transcription start site region 50489
Tssr50490	5	30408043 to 30408067	24	-	TSS region	transcription start site region 50490
Tssr50491	5	30408082 to 30408091	9	-	TSS region	transcription start site region 50491
Tssr1444	5	30461839 to 30461861	22	-	TSS region	transcription start site region 1444
Tssr50492	5	30461909 to 30461942	33	-	TSS region	transcription start site region 50492
Tssr1445	5	30461952 to 30461969	17	-	TSS region	transcription start site region 1445
Cpgi15679	5	30465928 to 30466288	360		CpG island	CpG island 15679
Tssr45583	5	30466044 to 30466092	48	+	TSS region	transcription start site region 45583
1700001C02Rik	5	30466047 to 30484088	18041	+	protein coding gene	RIKEN cDNA 1700001C02 gene
D5Jcs301	5	30471729 to 30471960	231		DNA segment	DNA segment, Chr 5, John C. Schimenti 301
D5Dcr37	5	30471842 to 30471938	96		DNA segment	DNA Segment, Chr 5, Derry C. Roopenian 37
Cib4	5	30485583 to 30545836	60253	-	protein coding gene	calcium and integrin binding family member 4