Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:29816719-30080717

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm1969 5 29832088 to 29833307 1219 - pseudogene predicted gene 1969
D5Jcs65 5 29863795 to 29863944 149 DNA segment DNA segment, Chr 5, John C. Schimenti 65
Gm42450 5 29886728 to 29891964 5236 - lincRNA gene predicted gene 42450
Tssr45554 5 29936387 to 29936395 8 + TSS region transcription start site region 45554
Gm43386 5 29946718 to 29950718 4000 - unclassified gene predicted gene 43386
Gm10469 5 29946719 to 29950717 3998 protein coding gene predicted gene 10469
A230098N10Rik 5 29996141 to 30008798 12657 - lincRNA gene RIKEN cDNA A230098N10 gene
Tssr50471 5 30008836 to 30008845 9 - TSS region transcription start site region 50471
D5Mit410 5 30012635 to 30012765 130 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 410
Tssr45555 5 30013084 to 30013089 5 + TSS region transcription start site region 45555
Il6 5 30013114 to 30019975 6861 + protein coding gene interleukin 6
Tssr45556 5 30013141 to 30013143 2 + TSS region transcription start site region 45556
Tssr45557 5 30013272 to 30013277 5 + TSS region transcription start site region 45557
Tssr45558 5 30013280 to 30013323 43 + TSS region transcription start site region 45558
Tssr45559 5 30013333 to 30013373 40 + TSS region transcription start site region 45559
Tssr45560 5 30013383 to 30013395 12 + TSS region transcription start site region 45560
Tssr45561 5 30013558 to 30013564 6 + TSS region transcription start site region 45561
Tssr45562 5 30013795 to 30013805 10 + TSS region transcription start site region 45562
Tssr45563 5 30013834 to 30013846 12 + TSS region transcription start site region 45563
D5Mit44 5 30013860 to 30014133 273 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 44
Tssr45564 5 30013910 to 30013915 5 + TSS region transcription start site region 45564
D5Nds8 5 30013962 to 30014079 117 DNA segment DNA segment, Chr 5, Nuffield Department of Surgery 8
Tssr45565 5 30013970 to 30013979 9 + TSS region transcription start site region 45565
Tssr45566 5 30014088 to 30014105 17 + TSS region transcription start site region 45566
Tssr50472 5 30014190 to 30014194 4 - TSS region transcription start site region 50472
Tssr45567 5 30017928 to 30017932 4 + TSS region transcription start site region 45567
Tssr45568 5 30019546 to 30019556 10 + TSS region transcription start site region 45568
Tssr45569 5 30020855 to 30020858 3 + TSS region transcription start site region 45569
C330025O08Rik 5 30038467 to 30039280 813 unclassified gene RIKEN cDNA C330025O08 gene
Tyms 5 30058202 to 30073617 15415 - protein coding gene thymidylate synthase
D5Mit176 5 30068614 to 30068701 87 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 176
Tssr50473 5 30072364 to 30072368 4 - TSS region transcription start site region 50473
Cpgi15671 5 30073181 to 30073741 560 CpG island CpG island 15671
Tssr50474 5 30073554 to 30073609 55 - TSS region transcription start site region 50474