Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:29129802-29478390

32 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Rnf32	5	29195185 to 29227635	32450	+	protein coding gene	ring finger protein 32
Cpgi15661	5	29195380 to 29196502	1122		CpG island	CpG island 15661
Tssr50458	5	29195795 to 29195827	32	-	TSS region	transcription start site region 50458
Tssr45526	5	29195983 to 29196032	49	+	TSS region	transcription start site region 45526
Tssr45527	5	29196033 to 29196063	30	+	TSS region	transcription start site region 45527
Tssr45528	5	29196070 to 29196085	15	+	TSS region	transcription start site region 45528
Tssr45529	5	29196101 to 29196123	22	+	TSS region	transcription start site region 45529
Gm7420	5	29217724 to 29218565	841	+	pseudogene	predicted gene 7420
Tssr45530	5	29223948 to 29223949	1	+	TSS region	transcription start site region 45530
4921534E14Rik	5	29226289 to 29228456	2167		unclassified gene	RIKEN cDNA 4921534E14 gene
Lmbr1	5	29229802 to 29378390	148588	-	protein coding gene	limb region 1
Gm42244	5	29271762 to 29274134	2372	-	lncRNA gene	predicted gene, 42244
C79130	5	29276002 to 29280297	4295	-	protein coding gene	expressed sequence C79130
Gm23801	5	29336780 to 29336846	66	-	miRNA gene	predicted gene, 23801
Tssr50459	5	29365092 to 29365100	8	-	TSS region	transcription start site region 50459
Tssr50460	5	29365147 to 29365151	4	-	TSS region	transcription start site region 50460
D5Jcs62	5	29366546 to 29366696	150		DNA segment	DNA segment, Chr 5, John C. Schimenti 62
Cpgi15662	5	29377716 to 29378912	1196		CpG island	CpG island 15662
Tssr45531	5	29377774 to 29377810	36	+	TSS region	transcription start site region 45531
Tssr50461	5	29378319 to 29378335	16	-	TSS region	transcription start site region 50461
Tssr50462	5	29378337 to 29378401	64	-	TSS region	transcription start site region 50462
Tssr45532	5	29378604 to 29378607	3	+	TSS region	transcription start site region 45532
4632411P08Rik	5	29378699 to 29390488	11789	+	lincRNA gene	RIKEN cDNA 4632411P08 gene
Gm36086	5	29386860 to 29388302	1442	-	lncRNA gene	predicted gene, 36086
Cpgi15663	5	29434589 to 29435487	898		CpG island	CpG island 15663
Nom1	5	29434659 to 29452169	17510	+	protein coding gene	nucleolar protein with MIF4G domain 1
Tssr45533	5	29434669 to 29434745	76	+	TSS region	transcription start site region 45533
Cpgi15664	5	29467644 to 29468342	698		CpG island	CpG island 15664
Cpgi15665	5	29471188 to 29471450	262		CpG island	CpG island 15665
Cpgi15666	5	29473816 to 29475033	1217		CpG island	CpG island 15666
Mnx1	5	29473823 to 29478470	4647	-	protein coding gene	motor neuron and pancreas homeobox 1
Cpgi15667	5	29477397 to 29479016	1619		CpG island	CpG island 15667