MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:28190398-28230405

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm35395	5	28189566 to 28200736	11170	+	lncRNA gene	predicted gene, 35395
Cnpy1	5	28200819 to 28245788	44969	-	protein coding gene	canopy FGF signaling regulator 1
Cpgi15654	5	28209265 to 28210478	1213		CpG island	CpG island 15654
Tssr50437	5	28209747 to 28209764	17	-	TSS region	transcription start site region 50437
Tssr50438	5	28209818 to 28209829	11	-	TSS region	transcription start site region 50438
Tssr50439	5	28209843 to 28209862	19	-	TSS region	transcription start site region 50439
Tssr50440	5	28209904 to 28209914	10	-	TSS region	transcription start site region 50440
Tssr50441	5	28209916 to 28209935	19	-	TSS region	transcription start site region 50441
Tssr50442	5	28209961 to 28209979	18	-	TSS region	transcription start site region 50442
Tssr50443	5	28210031 to 28210034	3	-	TSS region	transcription start site region 50443
Tssr50444	5	28210047 to 28210055	8	-	TSS region	transcription start site region 50444
Tssr50445	5	28210067 to 28210082	15	-	TSS region	transcription start site region 50445
Tssr50446	5	28210087 to 28210100	13	-	TSS region	transcription start site region 50446
Tssr45516	5	28210122 to 28210133	11	+	TSS region	transcription start site region 45516
Tssr50447	5	28210170 to 28210179	9	-	TSS region	transcription start site region 50447
Tssr50448	5	28210392 to 28210396	4	-	TSS region	transcription start site region 50448
Tssr50449	5	28210398 to 28210405	7	-	TSS region	transcription start site region 50449
Tssr50450	5	28210414 to 28210428	14	-	TSS region	transcription start site region 50450