MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:27398883-27798885

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Dpp6	5	26817357 to 27727500	910143	+	protein coding gene	dipeptidylpeptidase 6
D5Jcs73	5	27484699 to 27484849	150		DNA segment	DNA segment, Chr 5, John C. Schimenti 73
Speer4b	5	27495809 to 27501392	5583	-	protein coding gene	spermatogenesis associated glutamate (E)-rich protein 4B
Tssr1440	5	27537847 to 27537881	34	+	TSS region	transcription start site region 1440
D5Jcs74	5	27540150 to 27540291	141		DNA segment	DNA segment, Chr 5, John C. Schimenti 74
Gm16058	5	27552551 to 27553875	1324	-	antisense lncRNA gene	predicted gene 16058
Tssr45503	5	27598883 to 27598885	2	+	TSS region	transcription start site region 45503
Tssr45504	5	27709422 to 27709443	21	+	TSS region	transcription start site region 45504
D5Mit386	5	27722228 to 27722340	112		DNA segment	DNA Segment, Chr 5 Massachusetts Institute of Technology 386
Paxip1	5	27740080 to 27791691	51611	-	protein coding gene	PAX interacting (with transcription-activation domain) protein 1
Tssr50425	5	27745575 to 27745581	6	-	TSS region	transcription start site region 50425
Cpgi15639	5	27790728 to 27792103	1375		CpG island	CpG island 15639
Tssr50426	5	27791340 to 27791420	80	-	TSS region	transcription start site region 50426
Tssr50427	5	27791426 to 27791437	11	-	TSS region	transcription start site region 50427
Tssr50428	5	27791650 to 27791694	44	-	TSS region	transcription start site region 50428
Tssr45505	5	27791723 to 27791753	30	+	TSS region	transcription start site region 45505
Tssr45506	5	27791758 to 27791791	33	+	TSS region	transcription start site region 45506