Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:27007764-27757768

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dpp6 5 26817357 to 27727500 910143 + protein coding gene dipeptidylpeptidase 6
Cpgi15637 5 27049161 to 27050053 892 CpG island CpG island 15637
Tssr45487 5 27049369 to 27049424 55 + TSS region transcription start site region 45487
Tssr45488 5 27049544 to 27049572 28 + TSS region transcription start site region 45488
D5Jcs89 5 27051293 to 27051446 153 DNA segment DNA segment, Chr 5, John C. Schimenti 89
Tssr45489 5 27057839 to 27057847 8 + TSS region transcription start site region 45489
Tssr45490 5 27072649 to 27072673 24 + TSS region transcription start site region 45490
Tssr45491 5 27111381 to 27111395 14 + TSS region transcription start site region 45491
Tssr50424 5 27139126 to 27139161 35 - TSS region transcription start site region 50424
Tssr45492 5 27160626 to 27160639 13 + TSS region transcription start site region 45492
Tssr45493 5 27181456 to 27181459 3 + TSS region transcription start site region 45493
Gm43776 5 27195955 to 27198868 2913 + unclassified gene predicted gene 43776
Gm43502 5 27218185 to 27220780 2595 + unclassified gene predicted gene 43502
Cpgi15638 5 27261754 to 27262120 366 CpG island CpG island 15638
Tssr45494 5 27261916 to 27261980 64 + TSS region transcription start site region 45494
Tssr45495 5 27261981 to 27262003 22 + TSS region transcription start site region 45495
Tssr45496 5 27262016 to 27262031 15 + TSS region transcription start site region 45496
Tssr45497 5 27262048 to 27262064 16 + TSS region transcription start site region 45497
Tssr45498 5 27262068 to 27262125 57 + TSS region transcription start site region 45498
Tssr45499 5 27262200 to 27262210 10 + TSS region transcription start site region 45499
Tssr45500 5 27262222 to 27262236 14 + TSS region transcription start site region 45500
Tssr45501 5 27262256 to 27262261 5 + TSS region transcription start site region 45501
Gm34600 5 27281438 to 27284360 2922 - lncRNA gene predicted gene, 34600
Tssr45502 5 27382764 to 27382768 4 + TSS region transcription start site region 45502
D5Jcs73 5 27484699 to 27484849 150 DNA segment DNA segment, Chr 5, John C. Schimenti 73
Speer4b 5 27495809 to 27501392 5583 - protein coding gene spermatogenesis associated glutamate (E)-rich protein 4B
Tssr1440 5 27537847 to 27537881 34 + TSS region transcription start site region 1440
D5Jcs74 5 27540150 to 27540291 141 DNA segment DNA segment, Chr 5, John C. Schimenti 74
Gm16058 5 27552551 to 27553875 1324 - antisense lncRNA gene predicted gene 16058
Tssr45503 5 27598883 to 27598885 2 + TSS region transcription start site region 45503
Tssr45504 5 27709422 to 27709443 21 + TSS region transcription start site region 45504
D5Mit386 5 27722228 to 27722340 112 DNA segment DNA Segment, Chr 5 Massachusetts Institute of Technology 386
Paxip1 5 27740080 to 27791691 51611 - protein coding gene PAX interacting (with transcription-activation domain) protein 1
Tssr50425 5 27745575 to 27745581 6 - TSS region transcription start site region 50425