MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:25685514-25795551

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm43143	5	25687373 to 25689395	2022	-	unclassified gene	predicted gene 43143
Xrcc2	5	25689814 to 25705797	15983	-	protein coding gene	X-ray repair complementing defective repair in Chinese hamster cells 2
Cpgi15630	5	25705374 to 25705977	603		CpG island	CpG island 15630
Tssr50416	5	25705763 to 25705787	24	-	TSS region	transcription start site region 50416
Tssr50417	5	25705791 to 25705829	38	-	TSS region	transcription start site region 50417
Gm43142	5	25710226 to 25710586	360	+	pseudogene	predicted gene 43142
Tssr50418	5	25713192 to 25713203	11	-	TSS region	transcription start site region 50418
Tssr50419	5	25740514 to 25740551	37	-	TSS region	transcription start site region 50419
Tssr45473	5	25753580 to 25753595	15	+	TSS region	transcription start site region 45473
Cpgi15631	5	25759812 to 25760732	920		CpG island	CpG island 15631
Tssr45474	5	25759940 to 25759984	44	+	TSS region	transcription start site region 45474
Tssr45475	5	25759987 to 25760044	57	+	TSS region	transcription start site region 45475
Actr3b	5	25759997 to 25850688	90691	+	protein coding gene	ARP3 actin-related protein 3B
Gm42237	5	25767701 to 25777312	9611	+	lncRNA gene	predicted gene, 42237
Tssr45476	5	25768502 to 25768515	13	+	TSS region	transcription start site region 45476
Cpgi15632	5	25768785 to 25769232	447		CpG island	CpG island 15632
Tssr45477	5	25774965 to 25774968	3	+	TSS region	transcription start site region 45477