Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:25659997-25950688

28 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm43972	5	25659809 to 25661275	1466	+	lincRNA gene	predicted gene, 43972
Gm10062	5	25659809 to 25661275	1466	-	lincRNA gene	predicted gene 10062
Tssr50415	5	25665749 to 25665752	3	-	TSS region	transcription start site region 50415
Cpgi15629	5	25672242 to 25672422	180		CpG island	CpG island 15629
A630024J24Rik	5	25677726 to 25681202	3476		unclassified gene	RIKEN cDNA A630024J24 gene
Gm43143	5	25687373 to 25689395	2022	-	unclassified gene	predicted gene 43143
Xrcc2	5	25689814 to 25705797	15983	-	protein coding gene	X-ray repair complementing defective repair in Chinese hamster cells 2
Cpgi15630	5	25705374 to 25705977	603		CpG island	CpG island 15630
Tssr50416	5	25705763 to 25705787	24	-	TSS region	transcription start site region 50416
Tssr50417	5	25705791 to 25705829	38	-	TSS region	transcription start site region 50417
Gm43142	5	25710226 to 25710586	360	+	pseudogene	predicted gene 43142
Tssr50418	5	25713192 to 25713203	11	-	TSS region	transcription start site region 50418
Tssr50419	5	25740514 to 25740551	37	-	TSS region	transcription start site region 50419
Tssr45473	5	25753580 to 25753595	15	+	TSS region	transcription start site region 45473
Cpgi15631	5	25759812 to 25760732	920		CpG island	CpG island 15631
Tssr45474	5	25759940 to 25759984	44	+	TSS region	transcription start site region 45474
Tssr45475	5	25759987 to 25760044	57	+	TSS region	transcription start site region 45475
Actr3b	5	25759997 to 25850688	90691	+	protein coding gene	ARP3 actin-related protein 3B
Gm42237	5	25767701 to 25777312	9611	+	lncRNA gene	predicted gene, 42237
Tssr45476	5	25768502 to 25768515	13	+	TSS region	transcription start site region 45476
Cpgi15632	5	25768785 to 25769232	447		CpG island	CpG island 15632
Tssr45477	5	25774965 to 25774968	3	+	TSS region	transcription start site region 45477
Tssr45478	5	25848310 to 25848325	15	+	TSS region	transcription start site region 45478
Tssr45479	5	25848355 to 25848364	9	+	TSS region	transcription start site region 45479
D5Mit170	5	25874907 to 25875050	143		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 170
Gm21655	5	25919861 to 25926215	6354	-	unclassified non-coding RNA gene	predicted gene, 21655
Gm21663	5	25936984 to 25942530	5546	-	protein coding gene	predicted gene, 21663
Gm21671	5	25949797 to 25954344	4547	-	protein coding gene	predicted gene, 21671