MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:25041649-25121878

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Prkag2	5	24862744 to 25100642	237898	-	protein coding gene	protein kinase, AMP-activated, gamma 2 non-catalytic subunit
Tssr50390	5	25059442 to 25059453	11	-	TSS region	transcription start site region 50390
Tssr50391	5	25059617 to 25059627	10	-	TSS region	transcription start site region 50391
Cpgi15624	5	25081649 to 25081878	229		CpG island	CpG island 15624
Gm42232	5	25097747 to 25100004	2257	-	lncRNA gene	predicted gene, 42232
Cpgi15625	5	25099356 to 25101535	2179		CpG island	CpG island 15625
Tssr50392	5	25100189 to 25100212	23	-	TSS region	transcription start site region 50392
Tssr50393	5	25100220 to 25100232	12	-	TSS region	transcription start site region 50393
Tssr50394	5	25100400 to 25100457	57	-	TSS region	transcription start site region 50394
Tssr50395	5	25100579 to 25100586	7	-	TSS region	transcription start site region 50395
Tssr50396	5	25100596 to 25100614	18	-	TSS region	transcription start site region 50396
Tssr50397	5	25100624 to 25100657	33	-	TSS region	transcription start site region 50397
Tssr45454	5	25100700 to 25100759	59	+	TSS region	transcription start site region 45454
Tssr50398	5	25100890 to 25100932	42	-	TSS region	transcription start site region 50398
Tssr45455	5	25100923 to 25100988	65	+	TSS region	transcription start site region 45455
2900005J15Rik	5	25100975 to 25103007	2032	+	lncRNA gene	RIKEN cDNA 2900005J15 gene
Tssr50399	5	25101052 to 25101064	12	-	TSS region	transcription start site region 50399
Gm42233	5	25119371 to 25128316	8945	+	lncRNA gene	predicted gene, 42233