Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:24858430-24958482

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Prkag2 5 24862744 to 25100642 237898 - protein coding gene protein kinase, AMP-activated, gamma 2 non-catalytic subunit
Prkag2os2 5 24873544 to 24875934 2390 + antisense lncRNA gene protein kinase, AMP-activated, gamma 2 non-catalytic subunit, opposite strand 2
Tssr50375 5 24889914 to 24889927 13 - TSS region transcription start site region 50375
Tssr50376 5 24902445 to 24902456 11 - TSS region transcription start site region 50376
Prkag2os1 5 24902569 to 24906849 4280 + antisense lncRNA gene protein kinase, AMP-activated, gamma 2 non-catalytic subunit, opposite strand 1
2900019A20Rik 5 24903367 to 24904159 792 unclassified gene RIKEN cDNA 2900019A20 gene
Cpgi15623 5 24907712 to 24909096 1384 CpG island CpG island 15623
Tssr50377 5 24908374 to 24908428 54 - TSS region transcription start site region 50377
Tssr50378 5 24908430 to 24908482 52 - TSS region transcription start site region 50378
Tssr50379 5 24908560 to 24908583 23 - TSS region transcription start site region 50379
Tssr50380 5 24908671 to 24908683 12 - TSS region transcription start site region 50380
Tssr50381 5 24908763 to 24908777 14 - TSS region transcription start site region 50381
Imrfq1 5 24919119 to 24919241 122 QTL immune response to Factor IX QTL 1
Del(5D5Mit348-D5Mit389)6Jcs 5 24919119 to 30647294 5728175 complex/cluster/region deletion, Chr 5, John C. Schimenti 6
D5Mit348 5 24919119 to 24919241 122 DNA segment DNA Segment, Chr 5, Massachusetts Institute of Technology 348
Tssr45451 5 24919587 to 24919592 5 + TSS region transcription start site region 45451
Tssr50382 5 24925383 to 24925397 14 - TSS region transcription start site region 50382
Tssr50383 5 24925406 to 24925420 14 - TSS region transcription start site region 50383