Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Nub1 | 5 | 24563 | + | protein coding gene | negative regulator of ubiquitin-like proteins 1 | |
Gm26648 | 5 | 7788 | - | antisense lncRNA gene | predicted gene, 26648 | |
Tssr50361 | 5 | 15 | - | TSS region | transcription start site region 50361 | |
Tssr45447 | 5 | 17 | + | TSS region | transcription start site region 45447 | |
Tssr45448 | 5 | 24 | + | TSS region | transcription start site region 45448 | |
Wdr86 | 5 | 18989 | - | protein coding gene | WD repeat domain 86 | |
Cpgi15618 | 5 | 1289 | CpG island | CpG island 15618 | ||
Tssr50362 | 5 | 11 | - | TSS region | transcription start site region 50362 | |
Tssr50363 | 5 | 20 | - | TSS region | transcription start site region 50363 | |
Gm42231 | 5 | 9872 | + | lncRNA gene | predicted gene, 42231 | |
Cpgi15619 | 5 | 635 | CpG island | CpG island 15619 | ||
Tssr45449 | 5 | 21 | + | TSS region | transcription start site region 45449 | |
Crygn | 5 | 6841 | - | protein coding gene | crystallin, gamma N | |
Tssr50364 | 5 | 21 | - | TSS region | transcription start site region 50364 | |
Gm33591 | 5 | 1772 | + | lncRNA gene | predicted gene, 33591 | |
Cpgi15620 | 5 | 306 | CpG island | CpG island 15620 | ||
Tssr50365 | 5 | 13 | - | TSS region | transcription start site region 50365 | |
Cpgi15621 | 5 | 374 | CpG island | CpG island 15621 | ||
Rheb | 5 | 39538 | - | protein coding gene | Ras homolog enriched in brain | |
Tssr50366 | 5 | 5 | - | TSS region | transcription start site region 50366 | |
Gm25363 | 5 | 244 | - | unclassified non-coding RNA gene | predicted gene, 25363 | |
Tssr50367 | 5 | 7 | - | TSS region | transcription start site region 50367 | |
Cpgi15622 | 5 | 1664 | CpG island | CpG island 15622 | ||
Tssr50368 | 5 | 11 | - | TSS region | transcription start site region 50368 | |
Tssr50369 | 5 | 96 | - | TSS region | transcription start site region 50369 | |
Tssr50370 | 5 | 11 | - | TSS region | transcription start site region 50370 | |
Tssr50371 | 5 | 11 | - | TSS region | transcription start site region 50371 | |
Tssr50372 | 5 | 11 | - | TSS region | transcription start site region 50372 | |
Tssr50373 | 5 | 20 | - | TSS region | transcription start site region 50373 | |
Tssr50374 | 5 | 45 | - | TSS region | transcription start site region 50374 | |
Tssr45450 | 5 | 13 | + | TSS region | transcription start site region 45450 | |
Prkag2 | 5 | 237898 | - | protein coding gene | protein kinase, AMP-activated, gamma 2 non-catalytic subunit | |
Prkag2os2 | 5 | 2390 | + | antisense lncRNA gene | protein kinase, AMP-activated, gamma 2 non-catalytic subunit, opposite strand 2 | |
Tssr50375 | 5 | 13 | - | TSS region | transcription start site region 50375 | |
Tssr50376 | 5 | 11 | - | TSS region | transcription start site region 50376 | |
Prkag2os1 | 5 | 4280 | + | antisense lncRNA gene | protein kinase, AMP-activated, gamma 2 non-catalytic subunit, opposite strand 1 | |
2900019A20Rik | 5 | 792 | unclassified gene | RIKEN cDNA 2900019A20 gene | ||
Cpgi15623 | 5 | 1384 | CpG island | CpG island 15623 | ||
Tssr50377 | 5 | 54 | - | TSS region | transcription start site region 50377 | |
Tssr50378 | 5 | 52 | - | TSS region | transcription start site region 50378 | |
Tssr50379 | 5 | 23 | - | TSS region | transcription start site region 50379 | |
Tssr50380 | 5 | 12 | - | TSS region | transcription start site region 50380 | |
Tssr50381 | 5 | 14 | - | TSS region | transcription start site region 50381 | |
D5Mit348 | 5 | 122 | DNA segment | DNA Segment, Chr 5, Massachusetts Institute of Technology 348 | ||
Del(5D5Mit348-D5Mit389)6Jcs | 5 | 5728175 | complex/cluster/region | deletion, Chr 5, John C. Schimenti 6 | ||
Imrfq1 | 5 | 122 | QTL | immune response to Factor IX QTL 1 | ||
Tssr45451 | 5 | 5 | + | TSS region | transcription start site region 45451 | |
Tssr50382 | 5 | 14 | - | TSS region | transcription start site region 50382 | |
Tssr50383 | 5 | 14 | - | TSS region | transcription start site region 50383 | |
D5Mit349 | 5 | 139 | DNA segment | DNA Segment, Chr 5, Massachusetts Institute of Technology 349 | ||
Tssr45452 | 5 | 22 | + | TSS region | transcription start site region 45452 | |
1500035N22Rik | 5 | 12326 | + | lincRNA gene | RIKEN cDNA 1500035N22 gene | |
Tssr50384 | 5 | 5 | - | TSS region | transcription start site region 50384 | |
Tssr50385 | 5 | 14 | - | TSS region | transcription start site region 50385 | |
Tssr50386 | 5 | 11 | - | TSS region | transcription start site region 50386 | |
Tssr50387 | 5 | 11 | - | TSS region | transcription start site region 50387 | |
Tssr50388 | 5 | 7 | - | TSS region | transcription start site region 50388 | |
Tssr50389 | 5 | 35 | - | TSS region | transcription start site region 50389 | |
Tssr45453 | 5 | 17 | + | TSS region | transcription start site region 45453 | |
D5Mit74 | 5 | 215 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 74 | ||
Tssr50390 | 5 | 11 | - | TSS region | transcription start site region 50390 | |
Tssr50391 | 5 | 10 | - | TSS region | transcription start site region 50391 | |
Cpgi15624 | 5 | 229 | CpG island | CpG island 15624 | ||
Gm42232 | 5 | 2257 | - | lncRNA gene | predicted gene, 42232 | |
Cpgi15625 | 5 | 2179 | CpG island | CpG island 15625 | ||
Tssr50392 | 5 | 23 | - | TSS region | transcription start site region 50392 | |
Tssr50393 | 5 | 12 | - | TSS region | transcription start site region 50393 | |
Tssr50394 | 5 | 57 | - | TSS region | transcription start site region 50394 | |
Tssr50395 | 5 | 7 | - | TSS region | transcription start site region 50395 | |
Tssr50396 | 5 | 18 | - | TSS region | transcription start site region 50396 | |
Tssr50397 | 5 | 33 | - | TSS region | transcription start site region 50397 | |
Tssr45454 | 5 | 59 | + | TSS region | transcription start site region 45454 | |
Tssr50398 | 5 | 42 | - | TSS region | transcription start site region 50398 | |
Tssr45455 | 5 | 65 | + | TSS region | transcription start site region 45455 | |
2900005J15Rik | 5 | 2032 | + | lncRNA gene | RIKEN cDNA 2900005J15 gene | |
Tssr50399 | 5 | 12 | - | TSS region | transcription start site region 50399 | |
Gm42233 | 5 | 8945 | + | lncRNA gene | predicted gene, 42233 | |
Gm19088 | 5 | 553 | + | pseudogene | predicted gene, 19088 | |
Gm33836 | 5 | 7582 | + | lncRNA gene | predicted gene, 33836 | |
Gm26051 | 5 | 92 | - | miRNA gene | predicted gene, 26051 | |
Tssr45456 | 5 | 4 | + | TSS region | transcription start site region 45456 | |
Galntl5 | 5 | 38837 | + | protein coding gene | UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5 | |
Tssr1439 | 5 | 5 | + | TSS region | transcription start site region 1439 | |
Tssr45457 | 5 | 21 | + | TSS region | transcription start site region 45457 | |
Gm26356 | 5 | 282 | - | unclassified non-coding RNA gene | predicted gene, 26356 | |
D5Jcs71 | 5 | 161 | DNA segment | DNA segment, Chr 5, John C. Schimenti 71 | ||
Cpgi15626 | 5 | 624 | CpG island | CpG island 15626 | ||
Tssr45458 | 5 | 11 | + | TSS region | transcription start site region 45458 | |
E130116L18Rik | 5 | 305 | - | protein coding gene | RIKEN cDNA E130116L18 gene | |
Tssr45459 | 5 | 89 | + | TSS region | transcription start site region 45459 | |
Galnt11 | 5 | 43025 | + | protein coding gene | polypeptide N-acetylgalactosaminyltransferase 11 | |
Tssr45460 | 5 | 27 | + | TSS region | transcription start site region 45460 | |
Tssr45461 | 5 | 12 | + | TSS region | transcription start site region 45461 | |
Tssr45462 | 5 | 11 | + | TSS region | transcription start site region 45462 | |
Tssr45463 | 5 | 24 | + | TSS region | transcription start site region 45463 | |
Tssr45464 | 5 | 3 | + | TSS region | transcription start site region 45464 | |
Tssr45465 | 5 | 18 | + | TSS region | transcription start site region 45465 | |
Tssr50400 | 5 | 4 | - | TSS region | transcription start site region 50400 | |
Kmt2c | 5 | 226985 | - | protein coding gene | lysine (K)-specific methyltransferase 2C | |
Tssr50401 | 5 | 12 | - | TSS region | transcription start site region 50401 | |
Tssr50402 | 5 | 6 | - | TSS region | transcription start site region 50402 | |
Gm42585 | 5 | 4019 | + | unclassified gene | predicted gene 42585 | |
Hspe1-ps3 | 5 | 276 | + | pseudogene | heat shock protein 1 (chaperonin 10), pseudogene 3 | |
D5Ertd121e | 5 | 243 | DNA segment | DNA segment, Chr 5, ERATO Doi 121, expressed | ||
Gm20432 | 5 | 249 | - | pseudogene | predicted gene 20432 | |
Tssr50403 | 5 | 3 | - | TSS region | transcription start site region 50403 | |
D5Jcs72 | 5 | 104 | DNA segment | DNA segment, Chr 5, John C. Schimenti 72 | ||
Gm18343 | 5 | 603 | + | pseudogene | predicted gene, 18343 | |
Tssr50404 | 5 | 5 | - | TSS region | transcription start site region 50404 | |
Tssr50405 | 5 | 4 | - | TSS region | transcription start site region 50405 | |
Tssr50406 | 5 | 4 | - | TSS region | transcription start site region 50406 | |
Cpgi15627 | 5 | 2894 | CpG island | CpG island 15627 | ||
Tssr50407 | 5 | 22 | - | TSS region | transcription start site region 50407 | |
Tssr50408 | 5 | 24 | - | TSS region | transcription start site region 50408 | |
Tssr50409 | 5 | 38 | - | TSS region | transcription start site region 50409 | |
4831440E17Rik | 5 | 2474 | + | lincRNA gene | RIKEN cDNA 4831440E17 gene | |
Gm22656 | 5 | 170 | + | snRNA gene | predicted gene, 22656 | |
Tssr45466 | 5 | 1 | + | TSS region | transcription start site region 45466 | |
Tssr45467 | 5 | 9 | + | TSS region | transcription start site region 45467 | |
Tssr45468 | 5 | 1 | + | TSS region | transcription start site region 45468 | |
Tssr45469 | 5 | 41 | + | TSS region | transcription start site region 45469 | |
Cct8l1 | 5 | 1960 | + | protein coding gene | chaperonin containing TCP1, subunit 8 (theta)-like 1 | |
Cpgi15628 | 5 | 1128 | CpG island | CpG island 15628 | ||
Tssr50410 | 5 | 13 | - | TSS region | transcription start site region 50410 | |
Tssr50411 | 5 | 27 | - | TSS region | transcription start site region 50411 | |
Tssr50412 | 5 | 17 | - | TSS region | transcription start site region 50412 | |
Tssr45470 | 5 | 44 | + | TSS region | transcription start site region 45470 | |
Tssr45471 | 5 | 82 | + | TSS region | transcription start site region 45471 | |
1700096K18Rik | 5 | 1448 | + | lincRNA gene | RIKEN cDNA 1700096K18 gene | |
Gm43141 | 5 | 273 | - | pseudogene | predicted gene 43141 | |
Tssr50413 | 5 | 34 | - | TSS region | transcription start site region 50413 | |
Tssr50414 | 5 | 3 | - | TSS region | transcription start site region 50414 | |
Tssr45472 | 5 | 28 | + | TSS region | transcription start site region 45472 | |
Gm46903 | 5 | 24078 | - | lncRNA gene | predicted gene, 46903 | |
Gm42235 | 5 | 12479 | + | lncRNA gene | predicted gene, 42235 | |
Gm42234 | 5 | 8473 | + | lncRNA gene | predicted gene, 42234 | |
Gm43972 | 5 | 1466 | + | lincRNA gene | predicted gene, 43972 | |
Gm10062 | 5 | 1466 | - | lincRNA gene | predicted gene 10062 |