MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:24605494-24685500

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Smarcd3	5	24592622 to 24624456	31834	-	protein coding gene	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
D5Mit180	5	24605715 to 24605857	142		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 180
Tssr50354	5	24606341 to 24606378	37	-	TSS region	transcription start site region 50354
Tssr50355	5	24622646 to 24622653	7	-	TSS region	transcription start site region 50355
Tssr50356	5	24622659 to 24622680	21	-	TSS region	transcription start site region 50356
Tssr50357	5	24623472 to 24623483	11	-	TSS region	transcription start site region 50357
Cpgi15616	5	24623915 to 24624705	790		CpG island	CpG island 15616
Tssr50358	5	24624397 to 24624445	48	-	TSS region	transcription start site region 50358
Tssr45438	5	24645447 to 24645463	16	+	TSS region	transcription start site region 45438
1700022A21Rik	5	24645453 to 24648860	3407	+	pseudogene	RIKEN cDNA 1700022A21 gene
Tssr45439	5	24645465 to 24645470	5	+	TSS region	transcription start site region 45439
Tssr45440	5	24645482 to 24645483	1	+	TSS region	transcription start site region 45440
Tssr45441	5	24645494 to 24645500	6	+	TSS region	transcription start site region 45441
Tssr45442	5	24645501 to 24645506	5	+	TSS region	transcription start site region 45442
Tssr50359	5	24685352 to 24685389	37	-	TSS region	transcription start site region 50359
Tssr50360	5	24685414 to 24685439	25	-	TSS region	transcription start site region 50360
Cpgi15617	5	24685444 to 24686366	922		CpG island	CpG island 15617