Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:24581200-24601907

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm10221	5	24581554 to 24581862	308	-	pseudogene	predicted gene 10221
Cpgi15611	5	24586449 to 24587202	753		CpG island	CpG island 15611
Tssr45434	5	24586707 to 24586718	11	+	TSS region	transcription start site region 45434
Tssr45435	5	24586721 to 24586794	73	+	TSS region	transcription start site region 45435
Chpf2	5	24586741 to 24594556	7815	+	protein coding gene	chondroitin polymerizing factor 2
Tssr45436	5	24586798 to 24586822	24	+	TSS region	transcription start site region 45436
Tssr45437	5	24587137 to 24587165	28	+	TSS region	transcription start site region 45437
Cpgi15612	5	24591200 to 24591907	707		CpG island	CpG island 15612
Mir671	5	24592114 to 24592211	97	+	miRNA gene	microRNA 671
Smarcd3	5	24592622 to 24624456	31834	-	protein coding gene	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
Cpgi15613	5	24598408 to 24599011	603		CpG island	CpG island 15613
Tssr50342	5	24598634 to 24598654	20	-	TSS region	transcription start site region 50342
Tssr50343	5	24598722 to 24598766	44	-	TSS region	transcription start site region 50343
Tssr50344	5	24598904 to 24598918	14	-	TSS region	transcription start site region 50344
Tssr50345	5	24598919 to 24598929	10	-	TSS region	transcription start site region 50345
Tssr50346	5	24598933 to 24598955	22	-	TSS region	transcription start site region 50346
Cpgi15614	5	24601209 to 24602894	1685		CpG island	CpG island 15614
Tssr50347	5	24601858 to 24601904	46	-	TSS region	transcription start site region 50347