Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:24434586-24575052

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc4a2 5 24423837 to 24440950 17113 + protein coding gene solute carrier family 4 (anion exchanger), member 2
Gm22333 5 24438486 to 24438586 100 - snRNA gene predicted gene, 22333
Fastk 5 24441039 to 24445282 4243 - protein coding gene Fas-activated serine/threonine kinase
Cpgi15601 5 24444534 to 24446057 1523 CpG island CpG island 15601
Tssr50323 5 24445166 to 24445220 54 - TSS region transcription start site region 50323
Tssr50324 5 24445224 to 24445252 28 - TSS region transcription start site region 50324
Tssr50325 5 24445254 to 24445275 21 - TSS region transcription start site region 50325
Tmub1 5 24445458 to 24447854 2396 - protein coding gene transmembrane and ubiquitin-like domain containing 1
Cpgi15602 5 24447575 to 24448089 514 CpG island CpG island 15602
Tssr50326 5 24447775 to 24447830 55 - TSS region transcription start site region 50326
2310074N15Rik 5 24447908 to 24448489 581 + lincRNA gene RIKEN cDNA 2310074N15 gene
Gm10472 5 24449608 to 24451709 2101 - protein coding gene predicted gene 10472
Cpgi15603 5 24451437 to 24453318 1881 CpG island CpG island 15603
Tssr50327 5 24451702 to 24451746 44 - TSS region transcription start site region 50327
Tssr45426 5 24451937 to 24451969 32 + TSS region transcription start site region 45426
Tssr45427 5 24451973 to 24451990 17 + TSS region transcription start site region 45427
Agap3 5 24452177 to 24502047 49870 + protein coding gene ArfGAP with GTPase domain, ankyrin repeat and PH domain 3
Tssr45428 5 24471866 to 24471870 4 + TSS region transcription start site region 45428
Tssr45429 5 24473608 to 24473614 6 + TSS region transcription start site region 45429
Cpgi15604 5 24473946 to 24475622 1676 CpG island CpG island 15604
Tssr45430 5 24474155 to 24474184 29 + TSS region transcription start site region 45430
Tssr50328 5 24475598 to 24475610 12 - TSS region transcription start site region 50328
Tssr45431 5 24482769 to 24482774 5 + TSS region transcription start site region 45431
Tssr45432 5 24483904 to 24483921 17 + TSS region transcription start site region 45432
Gbx1 5 24504426 to 24526848 22422 - protein coding gene gastrulation brain homeobox 1
Cpgi15605 5 24504586 to 24505052 466 CpG island CpG island 15605
Cpgi15606 5 24525604 to 24527512 1908 CpG island CpG island 15606
Tssr50329 5 24526733 to 24526739 6 - TSS region transcription start site region 50329
Cpgi15607 5 24530135 to 24530572 437 CpG island CpG island 15607
Asb10 5 24532697 to 24540978 8281 - protein coding gene ankyrin repeat and SOCS box-containing 10
Cpgi15608 5 24537654 to 24537927 273 CpG island CpG island 15608
Tssr50330 5 24540378 to 24540383 5 - TSS region transcription start site region 50330
Tssr50331 5 24540384 to 24540395 11 - TSS region transcription start site region 50331
Tssr50332 5 24540413 to 24540422 9 - TSS region transcription start site region 50332
Tssr50333 5 24540423 to 24540426 3 - TSS region transcription start site region 50333
Tssr50334 5 24540439 to 24540451 12 - TSS region transcription start site region 50334
Tssr50335 5 24540940 to 24540950 10 - TSS region transcription start site region 50335
Tssr50336 5 24540976 to 24541008 32 - TSS region transcription start site region 50336
Iqca1l 5 24543434 to 24555469 12035 - protein coding gene IQ motif containing with AAA domain 1 like
Cpgi15609 5 24554448 to 24554707 259 CpG island CpG island 15609
Tssr50337 5 24555401 to 24555421 20 - TSS region transcription start site region 50337
Tssr50338 5 24555428 to 24555440 12 - TSS region transcription start site region 50338
Abcf2 5 24565345 to 24577467 12122 - protein coding gene ATP-binding cassette, sub-family F (GCN20), member 2