Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Slc4a2 | 5 | 17113 | + | protein coding gene | solute carrier family 4 (anion exchanger), member 2 | |
Gm22333 | 5 | 100 | - | snRNA gene | predicted gene, 22333 | |
Fastk | 5 | 4243 | - | protein coding gene | Fas-activated serine/threonine kinase | |
Cpgi15601 | 5 | 1523 | CpG island | CpG island 15601 | ||
Tssr50323 | 5 | 54 | - | TSS region | transcription start site region 50323 | |
Tssr50324 | 5 | 28 | - | TSS region | transcription start site region 50324 | |
Tssr50325 | 5 | 21 | - | TSS region | transcription start site region 50325 | |
Tmub1 | 5 | 2396 | - | protein coding gene | transmembrane and ubiquitin-like domain containing 1 | |
Cpgi15602 | 5 | 514 | CpG island | CpG island 15602 | ||
Tssr50326 | 5 | 55 | - | TSS region | transcription start site region 50326 | |
2310074N15Rik | 5 | 581 | + | lincRNA gene | RIKEN cDNA 2310074N15 gene | |
Gm10472 | 5 | 2101 | - | protein coding gene | predicted gene 10472 | |
Cpgi15603 | 5 | 1881 | CpG island | CpG island 15603 | ||
Tssr50327 | 5 | 44 | - | TSS region | transcription start site region 50327 | |
Tssr45426 | 5 | 32 | + | TSS region | transcription start site region 45426 | |
Tssr45427 | 5 | 17 | + | TSS region | transcription start site region 45427 | |
Agap3 | 5 | 49870 | + | protein coding gene | ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 | |
Tssr45428 | 5 | 4 | + | TSS region | transcription start site region 45428 | |
Tssr45429 | 5 | 6 | + | TSS region | transcription start site region 45429 | |
Cpgi15604 | 5 | 1676 | CpG island | CpG island 15604 | ||
Tssr45430 | 5 | 29 | + | TSS region | transcription start site region 45430 | |
Tssr50328 | 5 | 12 | - | TSS region | transcription start site region 50328 | |
Tssr45431 | 5 | 5 | + | TSS region | transcription start site region 45431 | |
Tssr45432 | 5 | 17 | + | TSS region | transcription start site region 45432 | |
Gbx1 | 5 | 22422 | - | protein coding gene | gastrulation brain homeobox 1 | |
Cpgi15605 | 5 | 466 | CpG island | CpG island 15605 | ||
Cpgi15606 | 5 | 1908 | CpG island | CpG island 15606 | ||
Tssr50329 | 5 | 6 | - | TSS region | transcription start site region 50329 | |
Cpgi15607 | 5 | 437 | CpG island | CpG island 15607 | ||
Asb10 | 5 | 8281 | - | protein coding gene | ankyrin repeat and SOCS box-containing 10 | |
Cpgi15608 | 5 | 273 | CpG island | CpG island 15608 | ||
Tssr50330 | 5 | 5 | - | TSS region | transcription start site region 50330 | |
Tssr50331 | 5 | 11 | - | TSS region | transcription start site region 50331 | |
Tssr50332 | 5 | 9 | - | TSS region | transcription start site region 50332 | |
Tssr50333 | 5 | 3 | - | TSS region | transcription start site region 50333 | |
Tssr50334 | 5 | 12 | - | TSS region | transcription start site region 50334 | |
Tssr50335 | 5 | 10 | - | TSS region | transcription start site region 50335 | |
Tssr50336 | 5 | 32 | - | TSS region | transcription start site region 50336 | |
Iqca1l | 5 | 12035 | - | protein coding gene | IQ motif containing with AAA domain 1 like | |
Cpgi15609 | 5 | 259 | CpG island | CpG island 15609 | ||
Tssr50337 | 5 | 20 | - | TSS region | transcription start site region 50337 | |
Tssr50338 | 5 | 12 | - | TSS region | transcription start site region 50338 | |
Abcf2 | 5 | 12122 | - | protein coding gene | ATP-binding cassette, sub-family F (GCN20), member 2 | |
Cpgi15610 | 5 | 1232 | CpG island | CpG island 15610 | ||
Tssr50339 | 5 | 11 | - | TSS region | transcription start site region 50339 | |
Tssr50340 | 5 | 59 | - | TSS region | transcription start site region 50340 | |
Tssr50341 | 5 | 16 | - | TSS region | transcription start site region 50341 | |
Tssr45433 | 5 | 42 | + | TSS region | transcription start site region 45433 | |
Gm10221 | 5 | 308 | - | pseudogene | predicted gene 10221 | |
Cpgi15611 | 5 | 753 | CpG island | CpG island 15611 | ||
Tssr45434 | 5 | 11 | + | TSS region | transcription start site region 45434 | |
Tssr45435 | 5 | 73 | + | TSS region | transcription start site region 45435 | |
Chpf2 | 5 | 7815 | + | protein coding gene | chondroitin polymerizing factor 2 | |
Tssr45436 | 5 | 24 | + | TSS region | transcription start site region 45436 | |
Tssr45437 | 5 | 28 | + | TSS region | transcription start site region 45437 | |
Cpgi15612 | 5 | 707 | CpG island | CpG island 15612 | ||
Mir671 | 5 | 97 | + | miRNA gene | microRNA 671 | |
Smarcd3 | 5 | 31834 | - | protein coding gene | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 | |
Cpgi15613 | 5 | 603 | CpG island | CpG island 15613 | ||
Tssr50342 | 5 | 20 | - | TSS region | transcription start site region 50342 | |
Tssr50343 | 5 | 44 | - | TSS region | transcription start site region 50343 | |
Tssr50344 | 5 | 14 | - | TSS region | transcription start site region 50344 | |
Tssr50345 | 5 | 10 | - | TSS region | transcription start site region 50345 | |
Tssr50346 | 5 | 22 | - | TSS region | transcription start site region 50346 | |
Cpgi15614 | 5 | 1685 | CpG island | CpG island 15614 | ||
Tssr50347 | 5 | 46 | - | TSS region | transcription start site region 50347 | |
Tssr50348 | 5 | 7 | - | TSS region | transcription start site region 50348 | |
Tssr50349 | 5 | 46 | - | TSS region | transcription start site region 50349 | |
Tssr50350 | 5 | 14 | - | TSS region | transcription start site region 50350 | |
Tssr50351 | 5 | 43 | - | TSS region | transcription start site region 50351 | |
Tssr50352 | 5 | 59 | - | TSS region | transcription start site region 50352 | |
Tssr50353 | 5 | 8 | - | TSS region | transcription start site region 50353 | |
Cpgi15615 | 5 | 1048 | CpG island | CpG island 15615 | ||
D5Mit180 | 5 | 142 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 180 | ||
Tssr50354 | 5 | 37 | - | TSS region | transcription start site region 50354 | |
Tssr50355 | 5 | 7 | - | TSS region | transcription start site region 50355 | |
Tssr50356 | 5 | 21 | - | TSS region | transcription start site region 50356 | |
Tssr50357 | 5 | 11 | - | TSS region | transcription start site region 50357 | |
Cpgi15616 | 5 | 790 | CpG island | CpG island 15616 | ||
Tssr50358 | 5 | 48 | - | TSS region | transcription start site region 50358 | |
Tssr45438 | 5 | 16 | + | TSS region | transcription start site region 45438 | |
1700022A21Rik | 5 | 3407 | + | pseudogene | RIKEN cDNA 1700022A21 gene | |
Tssr45439 | 5 | 5 | + | TSS region | transcription start site region 45439 | |
Tssr45440 | 5 | 1 | + | TSS region | transcription start site region 45440 | |
Tssr45441 | 5 | 6 | + | TSS region | transcription start site region 45441 | |
Tssr45442 | 5 | 5 | + | TSS region | transcription start site region 45442 | |
Tssr50359 | 5 | 37 | - | TSS region | transcription start site region 50359 | |
Tssr50360 | 5 | 25 | - | TSS region | transcription start site region 50360 | |
Cpgi15617 | 5 | 922 | CpG island | CpG island 15617 | ||
Tssr45443 | 5 | 4 | + | TSS region | transcription start site region 45443 | |
Nub1 | 5 | 24563 | + | protein coding gene | negative regulator of ubiquitin-like proteins 1 | |
Tssr45444 | 5 | 20 | + | TSS region | transcription start site region 45444 | |
Tssr45445 | 5 | 50 | + | TSS region | transcription start site region 45445 | |
Gm26648 | 5 | 7788 | - | antisense lncRNA gene | predicted gene, 26648 | |
Tssr45446 | 5 | 18 | + | TSS region | transcription start site region 45446 | |
Tssr50361 | 5 | 15 | - | TSS region | transcription start site region 50361 | |
Tssr45447 | 5 | 17 | + | TSS region | transcription start site region 45447 | |
Tssr45448 | 5 | 24 | + | TSS region | transcription start site region 45448 | |
Wdr86 | 5 | 18989 | - | protein coding gene | WD repeat domain 86 | |
Cpgi15618 | 5 | 1289 | CpG island | CpG island 15618 | ||
Tssr50362 | 5 | 11 | - | TSS region | transcription start site region 50362 | |
Tssr50363 | 5 | 20 | - | TSS region | transcription start site region 50363 | |
Gm42231 | 5 | 9872 | + | lncRNA gene | predicted gene, 42231 | |
Cpgi15619 | 5 | 635 | CpG island | CpG island 15619 | ||
Tssr45449 | 5 | 21 | + | TSS region | transcription start site region 45449 | |
Crygn | 5 | 6841 | - | protein coding gene | crystallin, gamma N | |
Tssr50364 | 5 | 21 | - | TSS region | transcription start site region 50364 | |
Gm33591 | 5 | 1772 | + | lncRNA gene | predicted gene, 33591 | |
Cpgi15620 | 5 | 306 | CpG island | CpG island 15620 | ||
Tssr50365 | 5 | 13 | - | TSS region | transcription start site region 50365 | |
Cpgi15621 | 5 | 374 | CpG island | CpG island 15621 | ||
Rheb | 5 | 39538 | - | protein coding gene | Ras homolog enriched in brain | |
Tssr50366 | 5 | 5 | - | TSS region | transcription start site region 50366 | |
Gm25363 | 5 | 244 | - | unclassified non-coding RNA gene | predicted gene, 25363 | |
Tssr50367 | 5 | 7 | - | TSS region | transcription start site region 50367 | |
Cpgi15622 | 5 | 1664 | CpG island | CpG island 15622 | ||
Tssr50368 | 5 | 11 | - | TSS region | transcription start site region 50368 | |
Tssr50369 | 5 | 96 | - | TSS region | transcription start site region 50369 | |
Tssr50370 | 5 | 11 | - | TSS region | transcription start site region 50370 | |
Tssr50371 | 5 | 11 | - | TSS region | transcription start site region 50371 | |
Tssr50372 | 5 | 11 | - | TSS region | transcription start site region 50372 | |
Tssr50373 | 5 | 20 | - | TSS region | transcription start site region 50373 | |
Tssr50374 | 5 | 45 | - | TSS region | transcription start site region 50374 | |
Tssr45450 | 5 | 13 | + | TSS region | transcription start site region 45450 | |
Prkag2 | 5 | 237898 | - | protein coding gene | protein kinase, AMP-activated, gamma 2 non-catalytic subunit | |
Prkag2os2 | 5 | 2390 | + | antisense lncRNA gene | protein kinase, AMP-activated, gamma 2 non-catalytic subunit, opposite strand 2 | |
Tssr50375 | 5 | 13 | - | TSS region | transcription start site region 50375 | |
Tssr50376 | 5 | 11 | - | TSS region | transcription start site region 50376 | |
Prkag2os1 | 5 | 4280 | + | antisense lncRNA gene | protein kinase, AMP-activated, gamma 2 non-catalytic subunit, opposite strand 1 | |
2900019A20Rik | 5 | 792 | unclassified gene | RIKEN cDNA 2900019A20 gene | ||
Cpgi15623 | 5 | 1384 | CpG island | CpG island 15623 | ||
Tssr50377 | 5 | 54 | - | TSS region | transcription start site region 50377 | |
Tssr50378 | 5 | 52 | - | TSS region | transcription start site region 50378 | |
Tssr50379 | 5 | 23 | - | TSS region | transcription start site region 50379 | |
Tssr50380 | 5 | 12 | - | TSS region | transcription start site region 50380 | |
Tssr50381 | 5 | 14 | - | TSS region | transcription start site region 50381 | |
Imrfq1 | 5 | 122 | QTL | immune response to Factor IX QTL 1 | ||
Del(5D5Mit348-D5Mit389)6Jcs | 5 | 5728175 | complex/cluster/region | deletion, Chr 5, John C. Schimenti 6 | ||
D5Mit348 | 5 | 122 | DNA segment | DNA Segment, Chr 5, Massachusetts Institute of Technology 348 | ||
Tssr45451 | 5 | 5 | + | TSS region | transcription start site region 45451 | |
Tssr50382 | 5 | 14 | - | TSS region | transcription start site region 50382 | |
Tssr50383 | 5 | 14 | - | TSS region | transcription start site region 50383 | |
D5Mit349 | 5 | 139 | DNA segment | DNA Segment, Chr 5, Massachusetts Institute of Technology 349 | ||
Tssr45452 | 5 | 22 | + | TSS region | transcription start site region 45452 | |
1500035N22Rik | 5 | 12326 | + | lincRNA gene | RIKEN cDNA 1500035N22 gene | |
Tssr50384 | 5 | 5 | - | TSS region | transcription start site region 50384 | |
Tssr50385 | 5 | 14 | - | TSS region | transcription start site region 50385 | |
Tssr50386 | 5 | 11 | - | TSS region | transcription start site region 50386 | |
Tssr50387 | 5 | 11 | - | TSS region | transcription start site region 50387 | |
Tssr50388 | 5 | 7 | - | TSS region | transcription start site region 50388 | |
Tssr50389 | 5 | 35 | - | TSS region | transcription start site region 50389 | |
Tssr45453 | 5 | 17 | + | TSS region | transcription start site region 45453 | |
D5Mit74 | 5 | 215 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 74 | ||
Tssr50390 | 5 | 11 | - | TSS region | transcription start site region 50390 | |
Tssr50391 | 5 | 10 | - | TSS region | transcription start site region 50391 | |
Cpgi15624 | 5 | 229 | CpG island | CpG island 15624 | ||
Gm42232 | 5 | 2257 | - | lncRNA gene | predicted gene, 42232 | |
Cpgi15625 | 5 | 2179 | CpG island | CpG island 15625 | ||
Tssr50392 | 5 | 23 | - | TSS region | transcription start site region 50392 | |
Tssr50393 | 5 | 12 | - | TSS region | transcription start site region 50393 | |
Tssr50394 | 5 | 57 | - | TSS region | transcription start site region 50394 | |
Tssr50395 | 5 | 7 | - | TSS region | transcription start site region 50395 | |
Tssr50396 | 5 | 18 | - | TSS region | transcription start site region 50396 | |
Tssr50397 | 5 | 33 | - | TSS region | transcription start site region 50397 | |
Tssr45454 | 5 | 59 | + | TSS region | transcription start site region 45454 | |
Tssr50398 | 5 | 42 | - | TSS region | transcription start site region 50398 | |
Tssr45455 | 5 | 65 | + | TSS region | transcription start site region 45455 | |
2900005J15Rik | 5 | 2032 | + | lncRNA gene | RIKEN cDNA 2900005J15 gene | |
Tssr50399 | 5 | 12 | - | TSS region | transcription start site region 50399 | |
Gm42233 | 5 | 8945 | + | lncRNA gene | predicted gene, 42233 | |
Gm19088 | 5 | 553 | + | pseudogene | predicted gene, 19088 | |
Gm33836 | 5 | 7582 | + | lncRNA gene | predicted gene, 33836 | |
Gm26051 | 5 | 92 | - | miRNA gene | predicted gene, 26051 | |
Tssr45456 | 5 | 4 | + | TSS region | transcription start site region 45456 | |
Galntl5 | 5 | 38837 | + | protein coding gene | UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5 | |
Tssr1439 | 5 | 5 | + | TSS region | transcription start site region 1439 | |
Tssr45457 | 5 | 21 | + | TSS region | transcription start site region 45457 | |
Gm26356 | 5 | 282 | - | unclassified non-coding RNA gene | predicted gene, 26356 | |
D5Jcs71 | 5 | 161 | DNA segment | DNA segment, Chr 5, John C. Schimenti 71 | ||
Cpgi15626 | 5 | 624 | CpG island | CpG island 15626 | ||
Tssr45458 | 5 | 11 | + | TSS region | transcription start site region 45458 | |
E130116L18Rik | 5 | 305 | - | protein coding gene | RIKEN cDNA E130116L18 gene | |
Tssr45459 | 5 | 89 | + | TSS region | transcription start site region 45459 | |
Galnt11 | 5 | 43025 | + | protein coding gene | polypeptide N-acetylgalactosaminyltransferase 11 | |
Tssr45460 | 5 | 27 | + | TSS region | transcription start site region 45460 | |
Tssr45461 | 5 | 12 | + | TSS region | transcription start site region 45461 | |
Tssr45462 | 5 | 11 | + | TSS region | transcription start site region 45462 | |
Tssr45463 | 5 | 24 | + | TSS region | transcription start site region 45463 | |
Tssr45464 | 5 | 3 | + | TSS region | transcription start site region 45464 | |
Tssr45465 | 5 | 18 | + | TSS region | transcription start site region 45465 | |
Tssr50400 | 5 | 4 | - | TSS region | transcription start site region 50400 | |
Kmt2c | 5 | 226985 | - | protein coding gene | lysine (K)-specific methyltransferase 2C | |
Tssr50401 | 5 | 12 | - | TSS region | transcription start site region 50401 | |
Tssr50402 | 5 | 6 | - | TSS region | transcription start site region 50402 | |
Gm42585 | 5 | 4019 | + | unclassified gene | predicted gene 42585 |