Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:23788248-23967647

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi15584 5 23787562 to 23788327 765 CpG island CpG island 15584
Rint1 5 23787711 to 23820369 32658 + protein coding gene RAD50 interactor 1
Gm43054 5 23790702 to 23791585 883 + unclassified gene predicted gene 43054
4933427G23Rik 5 23830133 to 23832436 2303 - pseudogene RIKEN cDNA 4933427G23 gene
Cpgi15585 5 23831073 to 23831794 721 CpG island CpG island 15585
Gm22054 5 23836167 to 23836321 154 - snRNA gene predicted gene, 22054
Tomm7 5 23838944 to 23844145 5201 - protein coding gene translocase of outer mitochondrial membrane 7
Cpgi15586 5 23844016 to 23844448 432 CpG island CpG island 15586
Tssr50296 5 23844085 to 23844151 66 - TSS region transcription start site region 50296
Gm42228 5 23849454 to 23852770 3316 - lncRNA gene predicted gene, 42228
Cpgi15587 5 23850374 to 23851024 650 CpG island CpG island 15587
Tssr45397 5 23850575 to 23850589 14 + TSS region transcription start site region 45397
Tssr45398 5 23850590 to 23850607 17 + TSS region transcription start site region 45398
2700038G22Rik 5 23850597 to 23855033 4436 + lincRNA gene RIKEN cDNA 2700038G22 gene
Snord93 5 23852233 to 23852277 44 + snoRNA gene small nucleolar RNA, C/D box 93
Gm9534 5 23863248 to 23892647 29399 - pseudogene predicted gene 9534
Tssr50297 5 23871360 to 23871365 5 - TSS region transcription start site region 50297
D5Jcs55 5 23894739 to 23894881 142 DNA segment DNA segment, Chr 5, John C. Schimenti 55
Fam126a 5 23915276 to 24030690 115414 - protein coding gene family with sequence similarity 126, member A
Tssr50298 5 23922660 to 23922694 34 - TSS region transcription start site region 50298
Tssr50299 5 23922914 to 23922929 15 - TSS region transcription start site region 50299