Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:23690648-23833711

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
AI506816	5	23698296 to 23712667	14371	-	lncRNA gene	expressed sequence AI506816
Gm29779	5	23701126 to 23703111	1985	-	protein coding gene	predicted gene, 29779
Gm42226	5	23703215 to 23705658	2443	-	protein coding gene	predicted gene, 42226
Mir3096	5	23710991 to 23711061	70	-	miRNA gene	microRNA 3096
Cpgi15582	5	23712230 to 23712942	712		CpG island	CpG island 15582
Tssr50292	5	23712661 to 23712691	30	-	TSS region	transcription start site region 50292
Tssr50293	5	23712853 to 23712887	34	-	TSS region	transcription start site region 50293
Pus7	5	23740648 to 23783711	43063	-	protein coding gene	pseudouridylate synthase 7
Cpgi15583	5	23782927 to 23783827	900		CpG island	CpG island 15583
Tssr50294	5	23783612 to 23783697	85	-	TSS region	transcription start site region 50294
Tssr50295	5	23783700 to 23783709	9	-	TSS region	transcription start site region 50295
Cpgi15584	5	23787562 to 23788327	765		CpG island	CpG island 15584
Tssr45395	5	23787691 to 23787751	60	+	TSS region	transcription start site region 45395
Rint1	5	23787711 to 23820369	32658	+	protein coding gene	RAD50 interactor 1
Tssr45396	5	23787757 to 23787774	17	+	TSS region	transcription start site region 45396
Gm43054	5	23790702 to 23791585	883	+	unclassified gene	predicted gene 43054
4933427G23Rik	5	23830133 to 23832436	2303	-	pseudogene	RIKEN cDNA 4933427G23 gene
Cpgi15585	5	23831073 to 23831794	721		CpG island	CpG island 15585