MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:23644739-23705546

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Srpk2	5	23503356 to 23684643	181287	-	protein coding gene	serine/arginine-rich protein specific kinase 2
Tssr50282	5	23669164 to 23669167	3	-	TSS region	transcription start site region 50282
Gm24009	5	23674289 to 23674381	92	-	rRNA gene	predicted gene, 24009
Gm43566	5	23674739 to 23675546	807	-	sense intronic lncRNA gene	predicted gene 43566
Cpgi15581	5	23674813 to 23676519	1706		CpG island	CpG island 15581
Tssr50283	5	23675789 to 23675802	13	-	TSS region	transcription start site region 50283
Tssr50284	5	23675814 to 23675838	24	-	TSS region	transcription start site region 50284
Tssr50285	5	23675927 to 23675938	11	-	TSS region	transcription start site region 50285
Tssr50286	5	23675941 to 23675997	56	-	TSS region	transcription start site region 50286
Tssr45394	5	23676114 to 23676129	15	+	TSS region	transcription start site region 45394
Tssr50287	5	23676434 to 23676489	55	-	TSS region	transcription start site region 50287
Tssr50288	5	23684583 to 23684586	3	-	TSS region	transcription start site region 50288
Tssr50289	5	23684593 to 23684602	9	-	TSS region	transcription start site region 50289
Tssr50290	5	23684608 to 23684636	28	-	TSS region	transcription start site region 50290
Tssr50291	5	23684647 to 23684652	5	-	TSS region	transcription start site region 50291
AI506816	5	23698296 to 23712667	14371	-	lncRNA gene	expressed sequence AI506816
Gm29779	5	23701126 to 23703111	1985	-	protein coding gene	predicted gene, 29779
Gm42226	5	23703215 to 23705658	2443	-	protein coding gene	predicted gene, 42226