Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:22545119-22745183

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Orc5 5 22486484 to 22550361 63877 - protein coding gene origin recognition complex, subunit 5
Cpgi15574 5 22550079 to 22550565 486 CpG island CpG island 15574
Tssr50254 5 22550250 to 22550261 11 - TSS region transcription start site region 50254
Tssr50255 5 22550279 to 22550386 107 - TSS region transcription start site region 50255
Tssr45349 5 22550391 to 22550442 51 + TSS region transcription start site region 45349
6030443J06Rik 5 22550413 to 22558171 7758 + lincRNA gene RIKEN cDNA 6030443J06 gene
Cpgi15575 5 22552553 to 22552849 296 CpG island CpG island 15575
Gm42225 5 22561408 to 22590038 28630 - lncRNA gene predicted gene, 42225
Gm9057 5 22563957 to 22564252 295 + pseudogene predicted gene 9057
Tssr50256 5 22589652 to 22589670 18 - TSS region transcription start site region 50256
Rpl17-ps5 5 22612628 to 22613182 554 - pseudogene ribosomal protein L17, pseudogene 5
Tssr50257 5 22613221 to 22613235 14 - TSS region transcription start site region 50257
Gm24512 5 22645119 to 22645183 64 - snRNA gene predicted gene, 24512
Gm9523 5 22693561 to 22694719 1158 - pseudogene predicted gene 9523
Gm32711 5 22722850 to 22723957 1107 - pseudogene predicted gene, 32711
Gm6560 5 22724578 to 22726168 1590 - pseudogene predicted gene 6560
A930003O13Rik 5 22738910 to 22746884 7974 - lincRNA gene RIKEN cDNA A930003O13 gene
Gm44363 5 22739019 to 22739111 92 + miRNA gene predicted gene, 44363