Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:22386484-22650361

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm43657 5 22400886 to 22404718 3832 - lincRNA gene predicted gene 43657
n-R5s170 5 22430331 to 22430443 112 - rRNA gene nuclear encoded rRNA 5S 170
Gm43110 5 22472767 to 22472992 225 - pseudogene predicted gene 43110
Cpgi15573 5 22472842 to 22473044 202 CpG island CpG island 15573
Orc5 5 22486484 to 22550361 63877 - protein coding gene origin recognition complex, subunit 5
Gm15421 5 22528221 to 22529030 809 - pseudogene predicted gene 15421
Tssr50252 5 22528710 to 22528715 5 - TSS region transcription start site region 50252
Tssr50253 5 22533276 to 22533297 21 - TSS region transcription start site region 50253
Gm22887 5 22534737 to 22534843 106 - snRNA gene predicted gene, 22887
Cpgi15574 5 22550079 to 22550565 486 CpG island CpG island 15574
Tssr50254 5 22550250 to 22550261 11 - TSS region transcription start site region 50254
Tssr50255 5 22550279 to 22550386 107 - TSS region transcription start site region 50255
Tssr45349 5 22550391 to 22550442 51 + TSS region transcription start site region 45349
6030443J06Rik 5 22550413 to 22558171 7758 + lincRNA gene RIKEN cDNA 6030443J06 gene
Cpgi15575 5 22552553 to 22552849 296 CpG island CpG island 15575
Gm42225 5 22561408 to 22590038 28630 - lncRNA gene predicted gene, 42225
Gm9057 5 22563957 to 22564252 295 + pseudogene predicted gene 9057
Tssr50256 5 22589652 to 22589670 18 - TSS region transcription start site region 50256
Rpl17-ps5 5 22612628 to 22613182 554 - pseudogene ribosomal protein L17, pseudogene 5
Tssr50257 5 22613221 to 22613235 14 - TSS region transcription start site region 50257
Gm24512 5 22645119 to 22645183 64 - snRNA gene predicted gene, 24512