Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:21874454-22354702

17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Reln	5	21884454 to 22344702	460248	-	protein coding gene	reelin
Gm16111	5	21889780 to 21890064	284	+	pseudogene	predicted gene 16111
Hmtb10	5	21895825 to 54342976	32447151		QTL	hemostasis and thrombosis 10
Hmtb11	5	21895825 to 64649236	42753411		QTL	hemostasis and thrombosis 11
Tssr45348	5	21901579 to 21901601	22	+	TSS region	transcription start site region 45348
Gm10475	5	21910931 to 21954014	43083	+	antisense lncRNA gene	predicted gene 10475
Dnaja1-ps	5	21951858 to 21952499	641	-	pseudogene	DnaJ heat shock protein family (Hsp40) member A1, pseudogene
Gm19666	5	21956094 to 21957986	1892	-	unclassified non-coding RNA gene	predicted gene, 19666
Actd2	5	22179522 to 22179654	132		QTL	activity-distance traveled 2
D5Mit72	5	22179522 to 22179654	132		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 72
D5Mit227	5	22179552 to 22179647	95		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 227
Gm16113	5	22281211 to 22281582	371	-	pseudogene	predicted gene 16113
Gm16112	5	22292787 to 22293168	381	+	pseudogene	predicted gene 16112
Gm16110	5	22334442 to 22336118	1676	+	antisense lncRNA gene	predicted gene 16110
Cpgi15572	5	22343732 to 22345618	1886		CpG island	CpG island 15572
Tssr50250	5	22344670 to 22344681	11	-	TSS region	transcription start site region 50250
Tssr50251	5	22344695 to 22344710	15	-	TSS region	transcription start site region 50251