Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:21686948-21787726

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Napepld 5 21662901 to 21701396 38495 - protein coding gene N-acyl phosphatidylethanolamine phospholipase D
Gm15719 5 21689557 to 21690175 618 + pseudogene predicted gene 15719
9530071P10Rik 5 21696281 to 21697594 1313 unclassified gene RIKEN cDNA 9530071P10 gene
Cpgi15567 5 21700966 to 21702005 1039 CpG island CpG island 15567
Tssr50243 5 21701332 to 21701404 72 - TSS region transcription start site region 50243
Tssr50244 5 21701525 to 21701535 10 - TSS region transcription start site region 50244
Cpgi15568 5 21736948 to 21737726 778 CpG island CpG island 15568
Tssr45343 5 21737142 to 21737179 37 + TSS region transcription start site region 45343
Pmpcb 5 21737160 to 21757152 19992 + protein coding gene peptidase (mitochondrial processing) beta
Gm15715 5 21748231 to 21748513 282 - pseudogene predicted gene 15715
Dnajc2 5 21757273 to 21785249 27976 - protein coding gene DnaJ heat shock protein family (Hsp40) member C2
Tssr50245 5 21768465 to 21768496 31 - TSS region transcription start site region 50245
Tssr50246 5 21773817 to 21773831 14 - TSS region transcription start site region 50246
Cpgi15569 5 21784417 to 21785340 923 CpG island CpG island 15569
Tssr50247 5 21785093 to 21785098 5 - TSS region transcription start site region 50247
Tssr50248 5 21785115 to 21785232 117 - TSS region transcription start site region 50248
Tssr45344 5 21785253 to 21785301 48 + TSS region transcription start site region 45344
Psmc2 5 21785283 to 21803784 18501 + protein coding gene proteasome (prosome, macropain) 26S subunit, ATPase 2
Cpgi15570 5 21786400 to 21787148 748 CpG island CpG island 15570
Tssr45345 5 21786739 to 21786784 45 + TSS region transcription start site region 45345
Tssr45346 5 21786791 to 21786804 13 + TSS region transcription start site region 45346