Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:21380197-21570201

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ccdc146 5 21292961 to 21424677 131716 - protein coding gene coiled-coil domain containing 146
Tssr45330 5 21381228 to 21381278 50 + TSS region transcription start site region 45330
Tssr50232 5 21424641 to 21424659 18 - TSS region transcription start site region 50232
Tssr50233 5 21424664 to 21424686 22 - TSS region transcription start site region 50233
Tssr50234 5 21424692 to 21424703 11 - TSS region transcription start site region 50234
Tssr45331 5 21424865 to 21424891 26 + TSS region transcription start site region 45331
Cpgi15563 5 21424878 to 21425672 794 CpG island CpG island 15563
Tssr45332 5 21424934 to 21425013 79 + TSS region transcription start site region 45332
Fam185a 5 21424958 to 21482124 57166 + protein coding gene family with sequence similarity 185, member A
Tssr45333 5 21425038 to 21425063 25 + TSS region transcription start site region 45333
D5Nam1 5 21452511 to 21452592 81 DNA segment DNA segment, Chr 5, Notre-Dame de la Paix 1
Tssr45334 5 21475197 to 21475201 4 + TSS region transcription start site region 45334
Fbxl13 5 21483847 to 21645634 161787 - protein coding gene F-box and leucine-rich repeat protein 13
Tssr45335 5 21543485 to 21543496 11 + TSS region transcription start site region 45335
Tssr45336 5 21543504 to 21543521 17 + TSS region transcription start site region 45336
Tssr45337 5 21543525 to 21543590 65 + TSS region transcription start site region 45337
Lrrc17 5 21543559 to 21575904 32345 + protein coding gene leucine rich repeat containing 17
Tssr45338 5 21543593 to 21543612 19 + TSS region transcription start site region 45338
Tssr45339 5 21543617 to 21543638 21 + TSS region transcription start site region 45339