Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:21249641-21599659

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gsap 5 21176284 to 21291719 115435 + protein coding gene gamma-secretase activating protein
Tssr45304 5 21251391 to 21251406 15 + TSS region transcription start site region 45304
Tssr45305 5 21251706 to 21251723 17 + TSS region transcription start site region 45305
Tssr45306 5 21256106 to 21256115 9 + TSS region transcription start site region 45306
Tssr45307 5 21256771 to 21256786 15 + TSS region transcription start site region 45307
Tssr45308 5 21256816 to 21256828 12 + TSS region transcription start site region 45308
Tssr1435 5 21256875 to 21256894 19 + TSS region transcription start site region 1435
Tssr45309 5 21256908 to 21256920 12 + TSS region transcription start site region 45309
Tssr45310 5 21256953 to 21256980 27 + TSS region transcription start site region 45310
Tssr45311 5 21256983 to 21257005 22 + TSS region transcription start site region 45311
Tssr45312 5 21257840 to 21257848 8 + TSS region transcription start site region 45312
Tssr45313 5 21257922 to 21257932 10 + TSS region transcription start site region 45313
Tssr45314 5 21257938 to 21257949 11 + TSS region transcription start site region 45314
Tssr45315 5 21258028 to 21258062 34 + TSS region transcription start site region 45315
Tssr45316 5 21258126 to 21258174 48 + TSS region transcription start site region 45316
Tssr45317 5 21258195 to 21258269 74 + TSS region transcription start site region 45317
Tssr45318 5 21265550 to 21265564 14 + TSS region transcription start site region 45318
Tssr45319 5 21266184 to 21266198 14 + TSS region transcription start site region 45319
Tssr45320 5 21266272 to 21266318 46 + TSS region transcription start site region 45320
Tssr45321 5 21269892 to 21269898 6 + TSS region transcription start site region 45321
Tssr45322 5 21278374 to 21278378 4 + TSS region transcription start site region 45322
Gm43214 5 21279270 to 21279621 351 - pseudogene predicted gene 43214
Tssr45323 5 21279623 to 21279626 3 + TSS region transcription start site region 45323
Ccdc146 5 21292961 to 21424677 131716 - protein coding gene coiled-coil domain containing 146
Tssr45324 5 21308440 to 21308444 4 + TSS region transcription start site region 45324
Tssr50231 5 21330690 to 21330703 13 - TSS region transcription start site region 50231
D5Mit294 5 21357317 to 21357511 194 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 294
Cpgi15562 5 21372579 to 21373105 526 CpG island CpG island 15562
Fgl2 5 21372673 to 21378386 5713 + protein coding gene fibrinogen-like protein 2
Tssr45325 5 21372696 to 21372714 18 + TSS region transcription start site region 45325
Tssr45326 5 21375438 to 21375449 11 + TSS region transcription start site region 45326
Tssr45327 5 21375720 to 21375731 11 + TSS region transcription start site region 45327
Tssr45328 5 21375752 to 21375774 22 + TSS region transcription start site region 45328
Tssr45329 5 21376488 to 21376500 12 + TSS region transcription start site region 45329
Tssr45330 5 21381228 to 21381278 50 + TSS region transcription start site region 45330
Tssr50232 5 21424641 to 21424659 18 - TSS region transcription start site region 50232
Tssr50233 5 21424664 to 21424686 22 - TSS region transcription start site region 50233
Tssr50234 5 21424692 to 21424703 11 - TSS region transcription start site region 50234
Tssr45331 5 21424865 to 21424891 26 + TSS region transcription start site region 45331
Cpgi15563 5 21424878 to 21425672 794 CpG island CpG island 15563
Tssr45332 5 21424934 to 21425013 79 + TSS region transcription start site region 45332
Fam185a 5 21424958 to 21482124 57166 + protein coding gene family with sequence similarity 185, member A
Tssr45333 5 21425038 to 21425063 25 + TSS region transcription start site region 45333
D5Nam1 5 21452511 to 21452592 81 DNA segment DNA segment, Chr 5, Notre-Dame de la Paix 1
Tssr45334 5 21475197 to 21475201 4 + TSS region transcription start site region 45334
Fbxl13 5 21483847 to 21645634 161787 - protein coding gene F-box and leucine-rich repeat protein 13
Tssr45335 5 21543485 to 21543496 11 + TSS region transcription start site region 45335
Tssr45336 5 21543504 to 21543521 17 + TSS region transcription start site region 45336
Tssr45337 5 21543525 to 21543590 65 + TSS region transcription start site region 45337
Lrrc17 5 21543559 to 21575904 32345 + protein coding gene leucine rich repeat containing 17
Tssr45338 5 21543593 to 21543612 19 + TSS region transcription start site region 45338
Tssr45339 5 21543617 to 21543638 21 + TSS region transcription start site region 45339
Cpgi15564 5 21597690 to 21597912 222 CpG island CpG island 15564
Gm6543 5 21598740 to 21599547 807 + pseudogene predicted gene 6543