Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:20979982-21129996

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16 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ptpn12 5 20986645 to 21055911 69266 - protein coding gene protein tyrosine phosphatase, non-receptor type 12
Tssr50224 5 20991986 to 20991995 9 - TSS region transcription start site region 50224
Tssr50225 5 21002834 to 21002847 13 - TSS region transcription start site region 50225
Tssr50226 5 21008638 to 21008644 6 - TSS region transcription start site region 50226
Gm43216 5 21031752 to 21033084 1332 + unclassified gene predicted gene 43216
Cpgi15560 5 21054586 to 21056496 1910 CpG island CpG island 15560
Tssr45289 5 21054982 to 21054996 14 + TSS region transcription start site region 45289
Tssr45290 5 21055035 to 21055046 11 + TSS region transcription start site region 45290
Tssr50227 5 21055854 to 21055868 14 - TSS region transcription start site region 50227
Tssr50228 5 21055880 to 21055961 81 - TSS region transcription start site region 50228
Gm42221 5 21055988 to 21096449 40461 + lncRNA gene predicted gene, 42221
Tssr50229 5 21055989 to 21056035 46 - TSS region transcription start site region 50229
Tssr45291 5 21056268 to 21056289 21 + TSS region transcription start site region 45291
Gm22490 5 21117083 to 21117201 118 - snoRNA gene predicted gene, 22490
Rpl31-ps21 5 21119149 to 21119522 373 - pseudogene ribosomal protein L31, pseudogene 21
Gm18830 5 21124017 to 21125412 1395 + pseudogene predicted gene, 18830