Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:20954586-21156496

19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
A630072M18Rik	5	20950989 to 20956398	5409	+	antisense lncRNA gene	RIKEN cDNA A630072M18 gene
Ptpn12	5	20986645 to 21055911	69266	-	protein coding gene	protein tyrosine phosphatase, non-receptor type 12
Tssr50224	5	20991986 to 20991995	9	-	TSS region	transcription start site region 50224
Tssr50225	5	21002834 to 21002847	13	-	TSS region	transcription start site region 50225
Tssr50226	5	21008638 to 21008644	6	-	TSS region	transcription start site region 50226
Gm43216	5	21031752 to 21033084	1332	+	unclassified gene	predicted gene 43216
Cpgi15560	5	21054586 to 21056496	1910		CpG island	CpG island 15560
Tssr45289	5	21054982 to 21054996	14	+	TSS region	transcription start site region 45289
Tssr45290	5	21055035 to 21055046	11	+	TSS region	transcription start site region 45290
Tssr50227	5	21055854 to 21055868	14	-	TSS region	transcription start site region 50227
Tssr50228	5	21055880 to 21055961	81	-	TSS region	transcription start site region 50228
Gm42221	5	21055988 to 21096449	40461	+	lncRNA gene	predicted gene, 42221
Tssr50229	5	21055989 to 21056035	46	-	TSS region	transcription start site region 50229
Tssr45291	5	21056268 to 21056289	21	+	TSS region	transcription start site region 45291
Gm22490	5	21117083 to 21117201	118	-	snoRNA gene	predicted gene, 22490
Rpl31-ps21	5	21119149 to 21119522	373	-	pseudogene	ribosomal protein L31, pseudogene 21
Gm18830	5	21124017 to 21125412	1395	+	pseudogene	predicted gene, 18830
Gm42660	5	21131076 to 21132022	946	+	unclassified gene	predicted gene 42660
Gm42222	5	21138099 to 21144961	6862	+	lncRNA gene	predicted gene, 42222