Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:20628394-20828892

11 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Magi2	5	19227036 to 20704792	1477756	+	protein coding gene	membrane associated guanylate kinase, WW and PDZ domain containing 2
D5Mit415	5	20658450 to 20658605	155		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 415
Tssr45273	5	20677680 to 20677687	7	+	TSS region	transcription start site region 45273
Cpgi15557	5	20701748 to 20703224	1476		CpG island	CpG island 15557
Tssr45274	5	20702129 to 20702214	85	+	TSS region	transcription start site region 45274
Gm29254	5	20702277 to 20706052	3775	+	lncRNA gene	predicted gene 29254
1110060G06Rik	5	20728394 to 20728892	498	+	unclassified gene	RIKEN cDNA 1110060G06 gene
Phtf2	5	20758664 to 20882124	123460	-	protein coding gene	putative homeodomain transcription factor 2
Tssr1433	5	20779295 to 20779342	47	+	TSS region	transcription start site region 1433
Rpl31-ps5	5	20806090 to 20806464	374	+	pseudogene	ribosomal protein L31, pseudogene 5
Gm42219	5	20807480 to 20812934	5454	+	lncRNA gene	predicted gene, 42219