Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:18432368-19996555

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm31752 5 18481705 to 18490194 8489 - lincRNA gene predicted gene, 31752
Tssr50213 5 18495200 to 18495225 25 - TSS region transcription start site region 50213
Tssr50214 5 18799611 to 18799639 28 - TSS region transcription start site region 50214
Gm17889 5 18814204 to 18814801 597 + pseudogene predicted gene, 17889
Gm23822 5 18864577 to 18864704 127 + snoRNA gene predicted gene, 23822
D5Mit332 5 18915468 to 18915604 136 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 332
D5Mit332.1 5 18915583 to 18915726 143 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 332.1
Gm43032 5 19198483 to 19201605 3122 - unclassified gene predicted gene 43032
4921504A21Rik 5 19202368 to 19226555 24187 - antisense lncRNA gene RIKEN cDNA 4921504A21 gene
Gm32102 5 19203672 to 19203912 240 + pseudogene predicted gene, 32102
Cpgi15556 5 19226256 to 19227800 1544 CpG island CpG island 15556
Tssr50215 5 19226671 to 19226696 25 - TSS region transcription start site region 50215
Tssr45258 5 19226742 to 19226800 58 + TSS region transcription start site region 45258
Tssr45259 5 19226902 to 19226990 88 + TSS region transcription start site region 45259
Magi2 5 19227036 to 20704792 1477756 + protein coding gene membrane associated guanylate kinase, WW and PDZ domain containing 2
Tssr45260 5 19227055 to 19227066 11 + TSS region transcription start site region 45260
Tssr45261 5 19227204 to 19227244 40 + TSS region transcription start site region 45261
Gm21009 5 19504455 to 19506123 1668 - pseudogene predicted gene, 21009
Gm25335 5 19515405 to 19515507 102 - snRNA gene predicted gene, 25335
D5Mit147 5 19530891 to 19530986 95 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 147
D5Ertd560e 5 19581085 to 19581316 231 DNA segment DNA segment, Chr 5, ERATO Doi 560, expressed
Tssr45262 5 19697038 to 19697044 6 + TSS region transcription start site region 45262
Tssr45263 5 19766730 to 19766764 34 + TSS region transcription start site region 45263
D5Mit250 5 19848423 to 19848541 118 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 250
Tssr45264 5 19907502 to 19907551 49 + TSS region transcription start site region 45264
Tssr45265 5 19907711 to 19907762 51 + TSS region transcription start site region 45265
Tssr45266 5 19907774 to 19907811 37 + TSS region transcription start site region 45266
Tssr45267 5 19952656 to 19952659 3 + TSS region transcription start site region 45267