MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:15307333-15852078

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm43391	5	15464171 to 15478876	14705	+	antisense lncRNA gene	predicted gene 43391
Gm21149	5	15471703 to 15476523	4820	-	protein coding gene	predicted gene, 21149
9930105H17Rik	5	15498801 to 15501506	2705		unclassified non-coding RNA gene	RIKEN cDNA 9930105H17 gene
Tssr1424	5	15507059 to 15507070	11	-	TSS region	transcription start site region 1424
Gm21847	5	15511563 to 15525867	14304	+	antisense lncRNA gene	predicted gene, 21847
Gm21190	5	15524456 to 15529222	4766	-	protein coding gene	predicted gene, 21190
Tssr1425	5	15577288 to 15577317	29	+	TSS region	transcription start site region 1425
Gm21083	5	15577333 to 15582078	4745	+	protein coding gene	predicted gene, 21083
Gm30613	5	15577483 to 15605125	27642	-	antisense lncRNA gene	predicted gene, 30613
Gm30417	5	15609971 to 15634110	24139	-	lncRNA gene	predicted gene, 30417
Tssr45208	5	15619087 to 15619110	23	+	TSS region	transcription start site region 45208
Speer4d	5	15619099 to 15623864	4765	+	protein coding gene	spermatogenesis associated glutamate (E)-rich protein 4D
4930572O03Rik	5	15652288 to 15657059	4771	-	protein coding gene	RIKEN cDNA 4930572O03 gene
Speer4cos	5	15680710 to 15714596	33886	+	antisense lncRNA gene	spermatogenesis associated glutamate (E)-rich protein 4C, opposite strand transcript
Speer4c	5	15709501 to 15714271	4770	-	protein coding gene	spermatogenesis associated glutamate (E)-rich protein 4C
Gm42452	5	15798001 to 15799033	1032	+	pseudogene	predicted gene 42452
Gm42454	5	15805564 to 15806744	1180	+	unclassified gene	predicted gene 42454