Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:151377824-151916208

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm42906 5 151063546 to 151428163 364617 - protein coding gene predicted gene 42906
D730045B01Rik 5 151367720 to 151428210 60490 - lincRNA gene RIKEN cDNA D730045B01 gene
1700028E10Rik 5 151368675 to 151414083 45408 + lncRNA gene RIKEN cDNA 1700028E10 gene
Tssr49979 5 151400105 to 151400146 41 + TSS region transcription start site region 49979
Tssr49980 5 151400239 to 151400250 11 + TSS region transcription start site region 49980
Tssr49981 5 151401113 to 151401134 21 + TSS region transcription start site region 49981
Tssr49982 5 151406500 to 151406511 11 + TSS region transcription start site region 49982
Gm3704 5 151406504 to 151432118 25614 + lncRNA gene predicted gene 3704
Tssr1763 5 151406542 to 151406551 9 + TSS region transcription start site region 1763
Gm36579 5 151416419 to 151423451 7032 + lncRNA gene predicted gene, 36579
Tssr54686 5 151428150 to 151428162 12 - TSS region transcription start site region 54686
Tssr54687 5 151428172 to 151428187 15 - TSS region transcription start site region 54687
Vmn2r-ps25 5 151435966 to 151461865 25899 - pseudogene vomeronasal 2, receptor, pseudogene 25
Tssr1764 5 151488483 to 151488484 1 + TSS region transcription start site region 1764
Vmn2r-ps26 5 151513135 to 151549267 36132 - pseudogene vomeronasal 2, receptor, pseudogene 26
Vmn2r18 5 151561661 to 151586924 25263 - protein coding gene vomeronasal 2, receptor 18
Vmn2r-ps27 5 151635991 to 151638218 2227 + pseudogene vomeronasal 2, receptor, pseudogene 27
Vmn2r-ps28 5 151640916 to 151641214 298 + pseudogene vomeronasal 2, receptor, pseudogene 28
Rfc3 5 151642824 to 151651208 8384 - protein coding gene replication factor C (activator 1) 3
Tssr54688 5 151645570 to 151645585 15 - TSS region transcription start site region 54688
Cpgi17118 5 151650751 to 151651370 619 CpG island CpG island 17118
Tssr54689 5 151651156 to 151651213 57 - TSS region transcription start site region 54689
Tssr54690 5 151651216 to 151651237 21 - TSS region transcription start site region 54690
Gm43038 5 151668049 to 151668136 87 - pseudogene predicted gene 43038
Gm43129 5 151685811 to 151693926 8115 + lincRNA gene predicted gene 43129
Gm24242 5 151700202 to 151700308 106 - snRNA gene predicted gene, 24242
Gm26463 5 151702368 to 151702468 100 - miRNA gene predicted gene, 26463