Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:150558007-150716183

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Brca2 5 150522630 to 150570329 47699 + protein coding gene breast cancer 2, early onset
Gm42529 5 150558429 to 150561015 2586 - antisense lncRNA gene predicted gene 42529
Gm42531 5 150562311 to 150566358 4047 + sense intronic lncRNA gene predicted gene 42531
Tssr54663 5 150566420 to 150566425 5 - TSS region transcription start site region 54663
Tssr49953 5 150566509 to 150566542 33 + TSS region transcription start site region 49953
Gm43690 5 150570833 to 150571098 265 - lincRNA gene predicted gene 43690
N4bp2l1 5 150571643 to 150594525 22882 - protein coding gene NEDD4 binding protein 2-like 1
Tssr54664 5 150583794 to 150583800 6 - TSS region transcription start site region 54664
Cpgi17108 5 150593160 to 150594889 1729 CpG island CpG island 17108
Tssr54665 5 150594471 to 150594488 17 - TSS region transcription start site region 54665
Tssr54666 5 150594493 to 150594535 42 - TSS region transcription start site region 54666
Gm43598 5 150597062 to 150599540 2478 - lincRNA gene predicted gene 43598
Cpgi17109 5 150598376 to 150598586 210 CpG island CpG island 17109
Gm43597 5 150599932 to 150607003 7071 - lincRNA gene predicted gene 43597
N4bp2l2 5 150608007 to 150666183 58176 - protein coding gene NEDD4 binding protein 2-like 2
Cpgi17110 5 150665009 to 150665791 782 CpG island CpG island 17110
Tssr54667 5 150665212 to 150665226 14 - TSS region transcription start site region 54667
Tssr49954 5 150665297 to 150665308 11 + TSS region transcription start site region 49954
Tssr54668 5 150665315 to 150665377 62 - TSS region transcription start site region 54668
Tssr54669 5 150665417 to 150665444 27 - TSS region transcription start site region 54669
Tssr54670 5 150665560 to 150665606 46 - TSS region transcription start site region 54670
Gm40353 5 150671178 to 150703016 31838 + protein coding gene predicted gene, 40353
Cpgi17111 5 150673306 to 150674786 1480 CpG island CpG island 17111
Pds5b 5 150673744 to 150810669 136925 + protein coding gene PDS5 cohesin associated factor B
Tssr49955 5 150673752 to 150673817 65 + TSS region transcription start site region 49955
Tssr49956 5 150673846 to 150673877 31 + TSS region transcription start site region 49956
Tssr49957 5 150673884 to 150673937 53 + TSS region transcription start site region 49957
D230040J21Rik 5 150678388 to 150681100 2712 unclassified gene RIKEN cDNA D230040J21 gene
Tssr49958 5 150684307 to 150684310 3 + TSS region transcription start site region 49958
Gm24630 5 150708044 to 150708149 105 + snRNA gene predicted gene, 24630
Gm26013 5 150710846 to 150710964 118 - snoRNA gene predicted gene, 26013