Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:149988379-150249239

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm21048 5 150001805 to 150003314 1509 - pseudogene predicted gene, 21048
Rxfp2 5 150018675 to 150082184 63509 + protein coding gene relaxin/insulin-like family peptide receptor 2
Tssr49928 5 150018783 to 150018799 16 + TSS region transcription start site region 49928
1700040A12Rik 5 150022478 to 150022742 264 unclassified gene RIKEN cDNA 1700040A12 gene
Gm42558 5 150022479 to 150022743 264 + sense intronic lncRNA gene predicted gene 42558
Cpgi17102 5 150022541 to 150022893 352 CpG island CpG island 17102
Tssr54660 5 150022732 to 150022766 34 - TSS region transcription start site region 54660
Gm38755 5 150061488 to 150063618 2130 - lncRNA gene predicted gene, 38755
Tssr54661 5 150062151 to 150062177 26 - TSS region transcription start site region 54661
Cpgi17103 5 150067084 to 150067344 260 CpG island CpG island 17103
Gm42557 5 150067258 to 150082795 15537 - antisense lncRNA gene predicted gene 42557
Tssr49929 5 150080596 to 150080618 22 + TSS region transcription start site region 49929
Tssr49930 5 150080636 to 150080645 9 + TSS region transcription start site region 49930
D5Mit122 5 150116320 to 150116477 157 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 122
Cpgi17104 5 150118379 to 150119239 860 CpG island CpG island 17104
Tssr49931 5 150118626 to 150118684 58 + TSS region transcription start site region 49931
Fry 5 150118645 to 150497753 379108 + protein coding gene FRY microtubule binding protein
Tssr1760 5 150129783 to 150129784 1 + TSS region transcription start site region 1760
D5Mit1000 5 150129844 to 150129965 121 DNA segment DNA Segment, Chr 5, Massachusetts Institute of Technology 1000
Tssr49932 5 150142634 to 150142645 11 + TSS region transcription start site region 49932
Tssr49933 5 150152886 to 150152887 1 + TSS region transcription start site region 49933
D5Mit286.2 5 150164142 to 150164279 137 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 286.2
D5Mit286 5 150164291 to 150164428 137 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 286
D5Dcr10 5 150164309 to 150164408 99 DNA segment DNA Segment, Chr 5, Derry C. Roopenian 10
Cpgi17105 5 150195778 to 150195993 215 CpG island CpG island 17105
Tssr49934 5 150196396 to 150196454 58 + TSS region transcription start site region 49934
Tssr49935 5 150197123 to 150197128 5 + TSS region transcription start site region 49935
Gm36378 5 150243863 to 150244250 387 + pseudogene predicted gene, 36378