MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:149922479-150122743

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm38754	5	149932070 to 149947557	15487	-	lncRNA gene	predicted gene, 38754
Gm21048	5	150001805 to 150003314	1509	-	pseudogene	predicted gene, 21048
Rxfp2	5	150018675 to 150082184	63509	+	protein coding gene	relaxin/insulin-like family peptide receptor 2
Tssr49928	5	150018783 to 150018799	16	+	TSS region	transcription start site region 49928
1700040A12Rik	5	150022478 to 150022742	264		unclassified gene	RIKEN cDNA 1700040A12 gene
Gm42558	5	150022479 to 150022743	264	+	sense intronic lncRNA gene	predicted gene 42558
Cpgi17102	5	150022541 to 150022893	352		CpG island	CpG island 17102
Tssr54660	5	150022732 to 150022766	34	-	TSS region	transcription start site region 54660
Gm38755	5	150061488 to 150063618	2130	-	lncRNA gene	predicted gene, 38755
Tssr54661	5	150062151 to 150062177	26	-	TSS region	transcription start site region 54661
Cpgi17103	5	150067084 to 150067344	260		CpG island	CpG island 17103
Gm42557	5	150067258 to 150082795	15537	-	antisense lncRNA gene	predicted gene 42557
Tssr49929	5	150080596 to 150080618	22	+	TSS region	transcription start site region 49929
Tssr49930	5	150080636 to 150080645	9	+	TSS region	transcription start site region 49930
D5Mit122	5	150116320 to 150116477	157		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 122
Cpgi17104	5	150118379 to 150119239	860		CpG island	CpG island 17104
Tssr49931	5	150118626 to 150118684	58	+	TSS region	transcription start site region 49931
Fry	5	150118645 to 150497753	379108	+	protein coding gene	FRY microtubule binding protein