Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:149035941-149162355

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hmgb1 5 149046702 to 149053057 6355 - protein coding gene high mobility group box 1
Tssr54613 5 149050594 to 149050605 11 - TSS region transcription start site region 54613
Cpgi17090 5 149051212 to 149053659 2447 CpG island CpG island 17090
Tssr54614 5 149051302 to 149051313 11 - TSS region transcription start site region 54614
Tssr54615 5 149051378 to 149051390 12 - TSS region transcription start site region 54615
Tssr54616 5 149051393 to 149051455 62 - TSS region transcription start site region 54616
Tssr54617 5 149051604 to 149051624 20 - TSS region transcription start site region 54617
Tssr54618 5 149051698 to 149051708 10 - TSS region transcription start site region 54618
Tssr54619 5 149051900 to 149051979 79 - TSS region transcription start site region 54619
Tssr54620 5 149053038 to 149053053 15 - TSS region transcription start site region 54620
Tssr54621 5 149053060 to 149053071 11 - TSS region transcription start site region 54621
Tssr49872 5 149053195 to 149053209 14 + TSS region transcription start site region 49872
Tssr1757 5 149053214 to 149053230 16 + TSS region transcription start site region 1757
D5Mit287 5 149053859 to 149054007 148 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 287
Gm30078 5 149067402 to 149069279 1877 + lncRNA gene predicted gene, 30078
Tssr54622 5 149068296 to 149068307 11 - TSS region transcription start site region 54622
Tssr49873 5 149068452 to 149068466 14 + TSS region transcription start site region 49873
Gm38752 5 149090941 to 149107355 16414 + lncRNA gene predicted gene, 38752
Mm2pr 5 149119565 to 149182036 62471 - lincRNA gene macrophage M2 polarization regulator
Tssr54623 5 149127723 to 149127734 11 - TSS region transcription start site region 54623
Gm42787 5 149128584 to 149129957 1373 + lincRNA gene predicted gene 42787
Tssr49874 5 149137064 to 149137078 14 + TSS region transcription start site region 49874
Tssr49875 5 149144257 to 149144283 26 + TSS region transcription start site region 49875
Gm42788 5 149144263 to 149153540 9277 + lincRNA gene predicted gene 42788
Gm23362 5 149145724 to 149145821 97 + snoRNA gene predicted gene, 23362
Gm8615 5 149155108 to 149156209 1101 - pseudogene predicted pseudogene 8615
Tssr49876 5 149157380 to 149157391 11 + TSS region transcription start site region 49876
Tssr49877 5 149157398 to 149157415 17 + TSS region transcription start site region 49877