Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:148939870-148999913

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm42791 5 148893775 to 148995147 101372 - protein coding gene predicted gene 42791
Gm15410 5 148946592 to 148948866 2274 - antisense lncRNA gene predicted gene 15410
Gm15406 5 148948897 to 148996566 47669 - lincRNA gene predicted gene 15406
8430423G03Rik 5 148950250 to 148951658 1408 + lincRNA gene RIKEN cDNA 8430423G03 gene
1810059H22Rik 5 148953748 to 148970122 16374 - unclassified non-coding RNA gene RIKEN cDNA 1810059H22 gene
Tssr54595 5 148955757 to 148955762 5 - TSS region transcription start site region 54595
Cpgi17084 5 148959147 to 148959716 569 CpG island CpG island 17084
Tssr49867 5 148959263 to 148959268 5 + TSS region transcription start site region 49867
Gm15409 5 148959278 to 148961712 2434 + lincRNA gene predicted gene 15409
Tssr54596 5 148959280 to 148959309 29 - TSS region transcription start site region 54596
Tssr49868 5 148959319 to 148959340 21 + TSS region transcription start site region 49868
Tssr54597 5 148959454 to 148959489 35 - TSS region transcription start site region 54597
Tssr54598 5 148959559 to 148959574 15 - TSS region transcription start site region 54598
Tssr49869 5 148959791 to 148959810 19 + TSS region transcription start site region 49869
Tssr54599 5 148959975 to 148960001 26 - TSS region transcription start site region 54599
Tssr54600 5 148967971 to 148967976 5 - TSS region transcription start site region 54600
Tssr54601 5 148969839 to 148969859 20 - TSS region transcription start site region 54601
Tssr54602 5 148969870 to 148969913 43 - TSS region transcription start site region 54602
Tssr54603 5 148969917 to 148969939 22 - TSS region transcription start site region 54603
5930430L01Rik 5 148990056 to 148995215 5159 - lincRNA gene RIKEN cDNA 5930430L01 gene
Cpgi17085 5 148995036 to 148995399 363 CpG island CpG island 17085
Tssr54604 5 148995161 to 148995173 12 - TSS region transcription start site region 54604
Tssr54605 5 148995176 to 148995201 25 - TSS region transcription start site region 54605
Tssr54606 5 148995208 to 148995233 25 - TSS region transcription start site region 54606
Gm15411 5 148995651 to 149015813 20162 - unclassified non-coding RNA gene predicted gene 15411
Tssr54607 5 148996543 to 148996571 28 - TSS region transcription start site region 54607
Tssr54608 5 148996608 to 148996620 12 - TSS region transcription start site region 54608