MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:148677950-148877988

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr54585	5	148678445 to 148678449	4	-	TSS region	transcription start site region 54585
Tssr49864	5	148678906 to 148678925	19	+	TSS region	transcription start site region 49864
Gm36186	5	148711466 to 148718397	6931	+	lincRNA gene	predicted gene, 36186
2210417A02Rik	5	148741840 to 148743139	1299	+	lincRNA gene	RIKEN cDNA 2210417A02 gene
Tssr1756	5	148741849 to 148741890	41	+	TSS region	transcription start site region 1756
Tssr54586	5	148746809 to 148746821	12	-	TSS region	transcription start site region 54586
n-R5s179	5	148753323 to 148753440	117	-	rRNA gene	nuclear encoded rRNA 5S 179
Tssr49865	5	148777950 to 148777988	38	+	TSS region	transcription start site region 49865
4930505K14Rik	5	148777963 to 148783080	5117	+	lincRNA gene	RIKEN cDNA 4930505K14 gene
Gm36405	5	148794317 to 148809286	14969	-	lncRNA gene	predicted gene, 36405
Cpgi17077	5	148794371 to 148794729	358		CpG island	CpG island 17077
Cpgi17078	5	148811761 to 148812204	443		CpG island	CpG island 17078
Cpgi17079	5	148820496 to 148820777	281		CpG island	CpG island 17079
Gm15407	5	148820767 to 148837798	17031	+	lincRNA gene	predicted gene 15407
Cpgi17080	5	148831745 to 148832220	475		CpG island	CpG island 17080
Cpgi17081	5	148837715 to 148837873	158		CpG island	CpG island 17081
Tssr49866	5	148866874 to 148866883	9	+	TSS region	transcription start site region 49866
Tssr54587	5	148867883 to 148867917	34	-	TSS region	transcription start site region 54587
Katnal1	5	148871584 to 148929160	57576	-	protein coding gene	katanin p60 subunit A-like 1