Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:148571849-148911890

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm35735 5 148572200 to 148579054 6854 + lncRNA gene predicted gene, 35735
Gm35994 5 148581119 to 148590791 9672 - lncRNA gene predicted gene, 35994
Gm35929 5 148584826 to 148589562 4736 - lncRNA gene predicted gene, 35929
Tssr54580 5 148589869 to 148589877 8 - TSS region transcription start site region 54580
Tssr54581 5 148590750 to 148590771 21 - TSS region transcription start site region 54581
Gm46929 5 148591229 to 148593977 2748 + lncRNA gene predicted gene, 46929
Gm29815 5 148613467 to 148613644 177 - pseudogene predicted gene, 29815
Gm36140 5 148634383 to 148640865 6482 + lncRNA gene predicted gene, 36140
Tssr54582 5 148652606 to 148652608 2 - TSS region transcription start site region 54582
Tssr54583 5 148652642 to 148652690 48 - TSS region transcription start site region 54583
Tssr54584 5 148652720 to 148652769 49 - TSS region transcription start site region 54584
Tssr49863 5 148653074 to 148653094 20 + TSS region transcription start site region 49863
Tssr54585 5 148678445 to 148678449 4 - TSS region transcription start site region 54585
Tssr49864 5 148678906 to 148678925 19 + TSS region transcription start site region 49864
Gm36186 5 148711466 to 148718397 6931 + lincRNA gene predicted gene, 36186
2210417A02Rik 5 148741840 to 148743139 1299 + lincRNA gene RIKEN cDNA 2210417A02 gene
Tssr1756 5 148741849 to 148741890 41 + TSS region transcription start site region 1756
Tssr54586 5 148746809 to 148746821 12 - TSS region transcription start site region 54586
n-R5s179 5 148753323 to 148753440 117 - rRNA gene nuclear encoded rRNA 5S 179
Tssr49865 5 148777950 to 148777988 38 + TSS region transcription start site region 49865
4930505K14Rik 5 148777963 to 148783080 5117 + lincRNA gene RIKEN cDNA 4930505K14 gene
Gm36405 5 148794317 to 148809286 14969 - lncRNA gene predicted gene, 36405
Cpgi17077 5 148794371 to 148794729 358 CpG island CpG island 17077
Cpgi17078 5 148811761 to 148812204 443 CpG island CpG island 17078
Cpgi17079 5 148820496 to 148820777 281 CpG island CpG island 17079
Gm15407 5 148820767 to 148837798 17031 + lincRNA gene predicted gene 15407
Cpgi17080 5 148831745 to 148832220 475 CpG island CpG island 17080
Cpgi17081 5 148837715 to 148837873 158 CpG island CpG island 17081
Tssr49866 5 148866874 to 148866883 9 + TSS region transcription start site region 49866
Tssr54587 5 148867883 to 148867917 34 - TSS region transcription start site region 54587
Katnal1 5 148871584 to 148929160 57576 - protein coding gene katanin p60 subunit A-like 1
Cpgi17082 5 148885828 to 148886200 372 CpG island CpG island 17082
Gm42791 5 148893775 to 148995147 101372 - protein coding gene predicted gene 42791