Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:148250146-148550149

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mtus2 5 147957320 to 148316065 358745 + protein coding gene microtubule associated tumor suppressor candidate 2
Tssr49850 5 148264901 to 148264918 17 + TSS region transcription start site region 49850
Tssr49851 5 148264929 to 148264944 15 + TSS region transcription start site region 49851
Cpgi17071 5 148264955 to 148265189 234 CpG island CpG island 17071
Tssr49852 5 148265202 to 148265263 61 + TSS region transcription start site region 49852
Tssr49853 5 148265265 to 148265305 40 + TSS region transcription start site region 49853
Tssr49854 5 148265307 to 148265318 11 + TSS region transcription start site region 49854
Cpgi17072 5 148288751 to 148289128 377 CpG island CpG island 17072
Tssr49855 5 148303176 to 148303236 60 + TSS region transcription start site region 49855
Cpgi17073 5 148303437 to 148303627 190 CpG island CpG island 17073
Slc7a1 5 148327410 to 148399904 72494 - protein coding gene solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
Tssr54549 5 148329920 to 148329933 13 - TSS region transcription start site region 54549
Tssr54550 5 148329938 to 148329981 43 - TSS region transcription start site region 54550
Tssr54551 5 148329996 to 148330019 23 - TSS region transcription start site region 54551
Tssr54552 5 148330064 to 148330078 14 - TSS region transcription start site region 54552
Tssr54553 5 148330109 to 148330121 12 - TSS region transcription start site region 54553
Tssr54554 5 148342108 to 148342156 48 - TSS region transcription start site region 54554
Tssr54555 5 148371525 to 148371532 7 - TSS region transcription start site region 54555
Tssr54556 5 148379568 to 148379572 4 - TSS region transcription start site region 54556
Tssr54557 5 148392810 to 148392816 6 - TSS region transcription start site region 54557
Tssr49856 5 148398876 to 148398902 26 + TSS region transcription start site region 49856
Cpgi17074 5 148398936 to 148400117 1181 CpG island CpG island 17074
Tssr49857 5 148399633 to 148399639 6 + TSS region transcription start site region 49857
Tssr54558 5 148399764 to 148399782 18 - TSS region transcription start site region 54558
Tssr54559 5 148399797 to 148399850 53 - TSS region transcription start site region 54559
Tssr54560 5 148399851 to 148399862 11 - TSS region transcription start site region 54560
Tssr54561 5 148399863 to 148399872 9 - TSS region transcription start site region 54561
Tssr54562 5 148399873 to 148399889 16 - TSS region transcription start site region 54562
Tssr54563 5 148399901 to 148399912 11 - TSS region transcription start site region 54563
Tssr49858 5 148399992 to 148400009 17 + TSS region transcription start site region 49858
Tssr54564 5 148400013 to 148400038 25 - TSS region transcription start site region 54564
Tssr49859 5 148400016 to 148400029 13 + TSS region transcription start site region 49859
Tssr49860 5 148400146 to 148400149 3 + TSS region transcription start site region 49860
Gm19617 5 148456838 to 148457145 307 + pseudogene predicted gene, 19617
Tssr54565 5 148489376 to 148489384 8 - TSS region transcription start site region 54565
Tssr49861 5 148489571 to 148489584 13 + TSS region transcription start site region 49861
4930549L11Rik 5 148489940 to 148490442 502 unclassified gene RIKEN cDNA 4930549L11 gene
Ubl3 5 148504635 to 148552789 48154 - protein coding gene ubiquitin-like 3
Tssr54566 5 148505848 to 148505861 13 - TSS region transcription start site region 54566
Tssr54567 5 148509351 to 148509362 11 - TSS region transcription start site region 54567
Tssr54568 5 148509364 to 148509381 17 - TSS region transcription start site region 54568
Tssr54569 5 148535200 to 148535202 2 - TSS region transcription start site region 54569