Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:147877518-148277786

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc46a3 5 147878437 to 147894815 16378 - protein coding gene solute carrier family 46, member 3
Cpgi17066 5 147894435 to 147895153 718 CpG island CpG island 17066
Tssr54540 5 147894777 to 147894786 9 - TSS region transcription start site region 54540
Tssr54541 5 147894787 to 147894798 11 - TSS region transcription start site region 54541
Tssr54542 5 147894804 to 147894830 26 - TSS region transcription start site region 54542
Tssr54543 5 147894831 to 147894838 7 - TSS region transcription start site region 54543
Tssr54544 5 147894841 to 147894849 8 - TSS region transcription start site region 54544
Tssr49846 5 147894952 to 147894990 38 + TSS region transcription start site region 49846
Tssr54545 5 147902158 to 147902168 10 - TSS region transcription start site region 54545
Gm46943 5 147918053 to 147918866 813 + lncRNA gene predicted gene, 46943
Gm15721 5 147949882 to 147957166 7284 - lincRNA gene predicted gene 15721
Cpgi17067 5 147956872 to 147958102 1230 CpG island CpG island 17067
Tssr49847 5 147957310 to 147957357 47 + TSS region transcription start site region 49847
Mtus2 5 147957320 to 148316065 358745 + protein coding gene microtubule associated tumor suppressor candidate 2
Tssr54546 5 147957729 to 147957737 8 - TSS region transcription start site region 54546
Tssr49848 5 147959358 to 147959369 11 + TSS region transcription start site region 49848
D5Mit1001 5 147982635 to 147982783 148 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 1001
Tssr54547 5 148012313 to 148012332 19 - TSS region transcription start site region 54547
Cpgi17068 5 148027075 to 148027345 270 CpG island CpG island 17068
Cpgi17069 5 148077518 to 148077786 268 CpG island CpG island 17069
Tssr49849 5 148138110 to 148138111 1 + TSS region transcription start site region 49849
Gm46928 5 148150012 to 148160182 10170 + lncRNA gene predicted gene, 46928
Gm10167 5 148182899 to 148184377 1478 - pseudogene predicted pseudogene 10167
Tssr54548 5 148184363 to 148184387 24 - TSS region transcription start site region 54548
Gm43553 5 148206228 to 148206912 684 + unclassified gene predicted gene 43553
Cpgi17070 5 148224015 to 148224364 349 CpG island CpG island 17070
Tssr49850 5 148264901 to 148264918 17 + TSS region transcription start site region 49850
Tssr49851 5 148264929 to 148264944 15 + TSS region transcription start site region 49851
Cpgi17071 5 148264955 to 148265189 234 CpG island CpG island 17071
Tssr49852 5 148265202 to 148265263 61 + TSS region transcription start site region 49852
Tssr49853 5 148265265 to 148265305 40 + TSS region transcription start site region 49853
Tssr49854 5 148265307 to 148265318 11 + TSS region transcription start site region 49854