MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:147617637-147827640

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Flt1	5	147562196 to 147726005	163809	-	protein coding gene	FMS-like tyrosine kinase 1
Tssr54531	5	147637299 to 147637314	15	-	TSS region	transcription start site region 54531
Tssr54532	5	147637460 to 147637467	7	-	TSS region	transcription start site region 54532
Tssr54533	5	147637492 to 147637503	11	-	TSS region	transcription start site region 54533
Gm35383	5	147658787 to 147668887	10100	+	lncRNA gene	predicted gene, 35383
Tssr49838	5	147681909 to 147681918	9	+	TSS region	transcription start site region 49838
Tssr54534	5	147688036 to 147688044	8	-	TSS region	transcription start site region 54534
D5Dcr8	5	147694583 to 147694680	97		DNA segment	DNA segment, Chr 5, Derry C. Roopenian 8
Tssr54535	5	147722637 to 147722640	3	-	TSS region	transcription start site region 54535
Cpgi17061	5	147724951 to 147726707	1756		CpG island	CpG island 17061
Tssr54536	5	147726002 to 147726023	21	-	TSS region	transcription start site region 54536
Tssr54537	5	147726326 to 147726357	31	-	TSS region	transcription start site region 54537
Cpgi17062	5	147734428 to 147734633	205		CpG island	CpG island 17062
Gm35541	5	147742195 to 147753209	11014	-	lncRNA gene	predicted gene, 35541
Gm43156	5	147745516 to 147749176	3660	+	lincRNA gene	predicted gene 43156
Cpgi17063	5	147751665 to 147751981	316		CpG island	CpG island 17063
Cpgi17064	5	147752890 to 147753298	408		CpG island	CpG island 17064
Gm35592	5	147761034 to 147765051	4017	-	lncRNA gene	predicted gene, 35592
Gm43155	5	147822245 to 147822738	493	+	pseudogene	predicted gene 43155