MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:147285900-147322249

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm35112	5	147290184 to 147297978	7794	-	lncRNA gene	predicted gene, 35112
Cpgi17050	5	147293319 to 147293481	162		CpG island	CpG island 17050
Cpgi17051	5	147294093 to 147294578	485		CpG island	CpG island 17051
Cpgi17052	5	147299517 to 147300099	582		CpG island	CpG island 17052
Cdx2	5	147300900 to 147307249	6349	-	protein coding gene	caudal type homeobox 2
Cpgi17053	5	147301770 to 147301982	212		CpG island	CpG island 17053
Cpgi17054	5	147304288 to 147305583	1295		CpG island	CpG island 17054
Tssr49810	5	147304944 to 147304946	2	+	TSS region	transcription start site region 49810
Tssr54505	5	147305449 to 147305459	10	-	TSS region	transcription start site region 54505
Cpgi17055	5	147305726 to 147307620	1894		CpG island	CpG island 17055
Tssr54506	5	147307038 to 147307049	11	-	TSS region	transcription start site region 54506
Tssr54507	5	147307063 to 147307139	76	-	TSS region	transcription start site region 54507
Tssr54508	5	147307216 to 147307230	14	-	TSS region	transcription start site region 54508
Tssr54509	5	147307233 to 147307256	23	-	TSS region	transcription start site region 54509
Tssr54510	5	147307264 to 147307281	17	-	TSS region	transcription start site region 54510
Cpgi17056	5	147312907 to 147313270	363		CpG island	CpG island 17056
Cpgi17057	5	147314939 to 147315713	774		CpG island	CpG island 17057
Urad	5	147314984 to 147322440	7456	-	protein coding gene	ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5) decarboxylase
Tssr54511	5	147322246 to 147322276	30	-	TSS region	transcription start site region 54511