Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:147240146-147300168

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14 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Plut 5 147228598 to 147271521 42923 - antisense lncRNA gene PDX1 associated lncRNA, upregulator of transcription
Cpgi17047 5 147253618 to 147253805 187 CpG island CpG island 17047
Tssr49807 5 147270091 to 147270102 11 + TSS region transcription start site region 49807
Tssr49808 5 147270110 to 147270139 29 + TSS region transcription start site region 49808
Cpgi17048 5 147270130 to 147270670 540 CpG island CpG island 17048
Pdx1 5 147270131 to 147275149 5018 + protein coding gene pancreatic and duodenal homeobox 1
Tssr49809 5 147270146 to 147270168 22 + TSS region transcription start site region 49809
Cpgi17049 5 147274478 to 147274949 471 CpG island CpG island 17049
Gm27033 5 147280720 to 147281263 543 + lincRNA gene predicted gene, 27033
Mir7k 5 147283189 to 147283298 109 - miRNA gene microRNA 7k
Gm35112 5 147290184 to 147297978 7794 - lncRNA gene predicted gene, 35112
Cpgi17050 5 147293319 to 147293481 162 CpG island CpG island 17050
Cpgi17051 5 147294093 to 147294578 485 CpG island CpG island 17051
Cpgi17052 5 147299517 to 147300099 582 CpG island CpG island 17052