MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:14701998-15162222

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Pclo	5	14514918 to 14863459	348541	+	protein coding gene	piccolo (presynaptic cytomatrix protein)
Gm26954	5	14696985 to 14723664	26679	-	antisense lncRNA gene	predicted gene, 26954
Tssr50124	5	14723666 to 14723679	13	-	TSS region	transcription start site region 50124
Tssr50125	5	14723681 to 14723698	17	-	TSS region	transcription start site region 50125
Tssr50126	5	14723699 to 14723704	5	-	TSS region	transcription start site region 50126
Tssr50127	5	14723708 to 14723721	13	-	TSS region	transcription start site region 50127
Tssr50128	5	14723731 to 14723740	9	-	TSS region	transcription start site region 50128
Gm43662	5	14778932 to 14781202	2270	+	unclassified gene	predicted gene 43662
Gm18668	5	14783234 to 14784377	1143	+	pseudogene	predicted gene, 18668
Gm43665	5	14804901 to 14806559	1658	+	unclassified gene	predicted gene 43665
Gm9758	5	14910122 to 14914899	4777	-	protein coding gene	predicted gene 9758
D5Mit103a	5	14931998 to 14932222	224		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 103a
Speer4e	5	14933631 to 14938475	4844	-	protein coding gene	spermatogenesis associated glutamate (E)-rich protein 4e
Speer8-ps1	5	14945294 to 14978541	33247	+	pseudogene	spermatogenesis associated glutamate (E)-rich protein 8, pseudogene 1
Gm10354	5	14974113 to 14978935	4822	-	protein coding gene	predicted gene 10354
D5Mit103b	5	15027288 to 15027520	232		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 103b
Gm17019	5	15028950 to 15032998	4048	-	protein coding gene	predicted gene 17019