Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:146848657-147055614

24 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
D5Mit223	5	146851021 to 146851125	104		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 223
Jcdq2	5	146851021 to 146851125	104		QTL	joint cartilage degeneration QTL 2
Prnr1	5	146851125 to 89271017	-57580108		QTL	prion resistance 1
Gm38748	5	146857856 to 146879911	22055	+	lncRNA gene	predicted gene, 38748
Tssr54491	5	146897039 to 146897059	20	-	TSS region	transcription start site region 54491
Tssr54492	5	146897091 to 146897101	10	-	TSS region	transcription start site region 54492
Tssr54493	5	146920374 to 146920383	9	-	TSS region	transcription start site region 54493
Cpgi17035	5	146948402 to 146949218	816		CpG island	CpG island 17035
Tssr49796	5	146948640 to 146948716	76	+	TSS region	transcription start site region 49796
Gtf3a	5	146948657 to 146955614	6957	+	protein coding gene	general transcription factor III A
Tssr49797	5	146948721 to 146948728	7	+	TSS region	transcription start site region 49797
Tssr49798	5	146948729 to 146948748	19	+	TSS region	transcription start site region 49798
Tssr49799	5	146948755 to 146948760	5	+	TSS region	transcription start site region 49799
Tssr49800	5	146948763 to 146948774	11	+	TSS region	transcription start site region 49800
Tssr49801	5	146948794 to 146948801	7	+	TSS region	transcription start site region 49801
Mtif3	5	146951573 to 146963800	12227	-	protein coding gene	mitochondrial translational initiation factor 3
Cpgi17036	5	146963246 to 146963865	619		CpG island	CpG island 17036
Tssr54494	5	146963742 to 146963805	63	-	TSS region	transcription start site region 54494
Cpgi17037	5	146974389 to 146974654	265		CpG island	CpG island 17037
Gm46936	5	146978789 to 146981774	2985	-	pseudogene	predicted gene, 46936
Lnx2	5	147016655 to 147076572	59917	-	protein coding gene	ligand of numb-protein X 2
Tssr54495	5	147018349 to 147018363	14	-	TSS region	transcription start site region 54495
Cpgi17038	5	147024302 to 147024639	337		CpG island	CpG island 17038
Tssr54496	5	147042664 to 147042673	9	-	TSS region	transcription start site region 54496