Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:146843755-147053760

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi17034 5 146844668 to 146845753 1085 CpG island CpG island 17034
Rasl11a 5 146845071 to 146847726 2655 + protein coding gene RAS-like, family 11, member A
Tssr49794 5 146845114 to 146845123 9 + TSS region transcription start site region 49794
Tssr49795 5 146845130 to 146845150 20 + TSS region transcription start site region 49795
Jcdq2 5 146851021 to 146851125 104 QTL joint cartilage degeneration QTL 2
D5Mit223 5 146851021 to 146851125 104 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 223
Prnr1 5 146851125 to 89271017 -57580108 QTL prion resistance 1
Gm38748 5 146857856 to 146879911 22055 + lncRNA gene predicted gene, 38748
Tssr54491 5 146897039 to 146897059 20 - TSS region transcription start site region 54491
Tssr54492 5 146897091 to 146897101 10 - TSS region transcription start site region 54492
Tssr54493 5 146920374 to 146920383 9 - TSS region transcription start site region 54493
Cpgi17035 5 146948402 to 146949218 816 CpG island CpG island 17035
Tssr49796 5 146948640 to 146948716 76 + TSS region transcription start site region 49796
Gtf3a 5 146948657 to 146955614 6957 + protein coding gene general transcription factor III A
Tssr49797 5 146948721 to 146948728 7 + TSS region transcription start site region 49797
Tssr49798 5 146948729 to 146948748 19 + TSS region transcription start site region 49798
Tssr49799 5 146948755 to 146948760 5 + TSS region transcription start site region 49799
Tssr49800 5 146948763 to 146948774 11 + TSS region transcription start site region 49800
Tssr49801 5 146948794 to 146948801 7 + TSS region transcription start site region 49801
Mtif3 5 146951573 to 146963800 12227 - protein coding gene mitochondrial translational initiation factor 3
Cpgi17036 5 146963246 to 146963865 619 CpG island CpG island 17036
Tssr54494 5 146963742 to 146963805 63 - TSS region transcription start site region 54494
Cpgi17037 5 146974389 to 146974654 265 CpG island CpG island 17037
Gm46936 5 146978789 to 146981774 2985 - pseudogene predicted gene, 46936
Lnx2 5 147016655 to 147076572 59917 - protein coding gene ligand of numb-protein X 2
Tssr54495 5 147018349 to 147018363 14 - TSS region transcription start site region 54495
Cpgi17038 5 147024302 to 147024639 337 CpG island CpG island 17038
Tssr54496 5 147042664 to 147042673 9 - TSS region transcription start site region 54496