Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:146792899-146872947

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Usp12 5 146734809 to 146794956 60147 - protein coding gene ubiquitin specific peptidase 12
Cpgi17031 5 146793845 to 146795339 1494 CpG island CpG island 17031
Tssr54485 5 146794771 to 146794782 11 - TSS region transcription start site region 54485
Tssr54486 5 146794788 to 146794834 46 - TSS region transcription start site region 54486
Tssr54487 5 146795002 to 146795009 7 - TSS region transcription start site region 54487
Tssr49786 5 146795911 to 146795935 24 + TSS region transcription start site region 49786
1700041I07Rik 5 146795918 to 146806433 10515 + lincRNA gene RIKEN cDNA 1700041I07 gene
Tssr49787 5 146795938 to 146795954 16 + TSS region transcription start site region 49787
Tssr54488 5 146821041 to 146821052 11 - TSS region transcription start site region 54488
Cpgi17032 5 146824627 to 146824877 250 CpG island CpG island 17032
Cpgi17033 5 146832692 to 146833626 934 CpG island CpG island 17033
Tssr54489 5 146832803 to 146832816 13 - TSS region transcription start site region 54489
Tssr54490 5 146832832 to 146832863 31 - TSS region transcription start site region 54490
Rpl21 5 146832890 to 146837032 4142 + protein coding gene ribosomal protein L21
Tssr49788 5 146832899 to 146832947 48 + TSS region transcription start site region 49788
Tssr49789 5 146832964 to 146832983 19 + TSS region transcription start site region 49789
Tssr49790 5 146832989 to 146832998 9 + TSS region transcription start site region 49790
Tssr49791 5 146833013 to 146833024 11 + TSS region transcription start site region 49791
Tssr49792 5 146833106 to 146833210 104 + TSS region transcription start site region 49792
Tssr49793 5 146833269 to 146833280 11 + TSS region transcription start site region 49793
Gm25091 5 146834834 to 146834904 70 + snoRNA gene predicted gene, 25091
Gm23202 5 146835144 to 146835272 128 + snoRNA gene predicted gene, 23202
Cpgi17034 5 146844668 to 146845753 1085 CpG island CpG island 17034
Rasl11a 5 146845071 to 146847726 2655 + protein coding gene RAS-like, family 11, member A
Tssr49794 5 146845114 to 146845123 9 + TSS region transcription start site region 49794
Tssr49795 5 146845130 to 146845150 20 + TSS region transcription start site region 49795
Jcdq2 5 146851021 to 146851125 104 QTL joint cartilage degeneration QTL 2
D5Mit223 5 146851021 to 146851125 104 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 223
Prnr1 5 146851125 to 89271017 -57580108 QTL prion resistance 1
Gm38748 5 146857856 to 146879911 22055 + lncRNA gene predicted gene, 38748