Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:14669113-15283935

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pclo 5 14514918 to 14863459 348541 + protein coding gene piccolo (presynaptic cytomatrix protein)
Tssr45206 5 14677450 to 14677452 2 + TSS region transcription start site region 45206
Tssr45207 5 14684954 to 14684958 4 + TSS region transcription start site region 45207
Tssr50123 5 14692959 to 14692960 1 - TSS region transcription start site region 50123
Gm26954 5 14696985 to 14723664 26679 - antisense lncRNA gene predicted gene, 26954
Tssr50124 5 14723666 to 14723679 13 - TSS region transcription start site region 50124
Tssr50125 5 14723681 to 14723698 17 - TSS region transcription start site region 50125
Tssr50126 5 14723699 to 14723704 5 - TSS region transcription start site region 50126
Tssr50127 5 14723708 to 14723721 13 - TSS region transcription start site region 50127
Tssr50128 5 14723731 to 14723740 9 - TSS region transcription start site region 50128
Gm43662 5 14778932 to 14781202 2270 + unclassified gene predicted gene 43662
Gm18668 5 14783234 to 14784377 1143 + pseudogene predicted gene, 18668
Gm43665 5 14804901 to 14806559 1658 + unclassified gene predicted gene 43665
Gm9758 5 14910122 to 14914899 4777 - protein coding gene predicted gene 9758
D5Mit103a 5 14931998 to 14932222 224 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 103a
Speer4e 5 14933631 to 14938475 4844 - protein coding gene spermatogenesis associated glutamate (E)-rich protein 4e
Speer8-ps1 5 14945294 to 14978541 33247 + pseudogene spermatogenesis associated glutamate (E)-rich protein 8, pseudogene 1
Gm10354 5 14974113 to 14978935 4822 - protein coding gene predicted gene 10354
D5Mit103b 5 15027288 to 15027520 232 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 103b
Gm17019 5 15028950 to 15032998 4048 - protein coding gene predicted gene 17019